Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
HMGCLP35914 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
HMGCLP35914 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
HMGCLP35914 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
HMGCLP35914 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HMGCLP35914 WHAMMP2-203ENST00000563942 1603 ntBASIC25.72■■□□□ 1.71
HMGCLP35914 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
HMGCLP35914 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.71■■□□□ 1.71
HMGCLP35914 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
HMGCLP35914 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.71■■□□□ 1.71
HMGCLP35914 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.71■■□□□ 1.71
HMGCLP35914 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
HMGCLP35914 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
HMGCLP35914 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
HMGCLP35914 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
HMGCLP35914 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
HMGCLP35914 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
HMGCLP35914 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.69■■□□□ 1.7
HMGCLP35914 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.68■■□□□ 1.7
HMGCLP35914 ABHD17AP4-201ENST00000411545 909 ntBASIC25.68■■□□□ 1.7
HMGCLP35914 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
HMGCLP35914 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.68■■□□□ 1.7
HMGCLP35914 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.67■■□□□ 1.7
HMGCLP35914 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HMGCLP35914 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HMGCLP35914 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
HMGCLP35914 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.67■■□□□ 1.7
HMGCLP35914 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HMGCLP35914 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HMGCLP35914 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.66■■□□□ 1.7
HMGCLP35914 ZNRF2P2-203ENST00000454624 420 ntBASIC25.66■■□□□ 1.7
HMGCLP35914 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HMGCLP35914 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
HMGCLP35914 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.65■■□□□ 1.7
HMGCLP35914 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
HMGCLP35914 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HMGCLP35914 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HMGCLP35914 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HMGCLP35914 AC100797.4-201ENST00000631653 1827 ntBASIC25.64■■□□□ 1.7
HMGCLP35914 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.64■■□□□ 1.69
HMGCLP35914 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.63■■□□□ 1.69
HMGCLP35914 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HMGCLP35914 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.63■■□□□ 1.69
HMGCLP35914 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.63■■□□□ 1.69
HMGCLP35914 LINC01971-201ENST00000617888 1048 ntBASIC25.62■■□□□ 1.69
HMGCLP35914 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
HMGCLP35914 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.61■■□□□ 1.69
HMGCLP35914 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HMGCLP35914 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
HMGCLP35914 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
HMGCLP35914 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.59■■□□□ 1.69
HMGCLP35914 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HMGCLP35914 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HMGCLP35914 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HMGCLP35914 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HMGCLP35914 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCLP35914 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.57■■□□□ 1.68
HMGCLP35914 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCLP35914 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCLP35914 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCLP35914 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCLP35914 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.57■■□□□ 1.68
HMGCLP35914 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCLP35914 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCLP35914 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HMGCLP35914 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HMGCLP35914 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HMGCLP35914 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
HMGCLP35914 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.54■■□□□ 1.68
HMGCLP35914 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.54■■□□□ 1.68
HMGCLP35914 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCLP35914 DRD5P2-201ENST00000421395 2012 ntBASIC25.54■■□□□ 1.68
HMGCLP35914 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCLP35914 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCLP35914 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.53■■□□□ 1.68
HMGCLP35914 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.53■■□□□ 1.68
HMGCLP35914 DUX4L11-201ENST00000611504 1267 ntBASIC25.52■■□□□ 1.68
HMGCLP35914 DUX4L12-201ENST00000614593 1267 ntBASIC25.52■■□□□ 1.68
HMGCLP35914 DUX4L14-201ENST00000621227 1267 ntBASIC25.52■■□□□ 1.68
HMGCLP35914 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
HMGCLP35914 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.51■■□□□ 1.67
HMGCLP35914 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCLP35914 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCLP35914 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCLP35914 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCLP35914 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
HMGCLP35914 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCLP35914 DUX4L13-201ENST00000554103 1267 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L15-201ENST00000611059 1267 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L23-201ENST00000615195 1269 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L24-201ENST00000617576 1269 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L22-201ENST00000618238 1269 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L20-201ENST00000619712 1269 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L21-201ENST00000622058 1269 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L10-201ENST00000622460 1267 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 DUX4L25-201ENST00000624915 1269 ntBASIC25.48■■□□□ 1.67
HMGCLP35914 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.48■■□□□ 1.67
HMGCLP35914 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HMGCLP35914 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HMGCLP35914 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms