Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0CP27449 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0CP27449 LINC01003-201ENST00000564834 1764 ntBASIC20.51■□□□□ 0.87
ATP6V0CP27449 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP6V0CP27449 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ATP6V0CP27449 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V0CP27449 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V0CP27449 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V0CP27449 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP6V0CP27449 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V0CP27449 AC010864.1-201ENST00000609407 1511 ntBASIC20.47■□□□□ 0.87
ATP6V0CP27449 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V0CP27449 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP6V0CP27449 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP6V0CP27449 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP6V0CP27449 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ATP6V0CP27449 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP6V0CP27449 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP6V0CP27449 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP6V0CP27449 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP6V0CP27449 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP6V0CP27449 AC091060.1-201ENST00000623524 1766 ntBASIC20.44■□□□□ 0.86
ATP6V0CP27449 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
ATP6V0CP27449 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.43■□□□□ 0.86
ATP6V0CP27449 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.43■□□□□ 0.86
ATP6V0CP27449 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP6V0CP27449 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP6V0CP27449 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP6V0CP27449 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP6V0CP27449 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP6V0CP27449 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP6V0CP27449 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ATP6V0CP27449 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP6V0CP27449 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
ATP6V0CP27449 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0CP27449 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0CP27449 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0CP27449 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0CP27449 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP6V0CP27449 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP6V0CP27449 AP004833.2-201ENST00000532228 1454 ntBASIC20.39■□□□□ 0.85
ATP6V0CP27449 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6V0CP27449 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ATP6V0CP27449 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0CP27449 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0CP27449 AC020928.2-201ENST00000588717 2197 ntBASIC20.38■□□□□ 0.85
ATP6V0CP27449 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6V0CP27449 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0CP27449 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0CP27449 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0CP27449 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0CP27449 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0CP27449 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 AC006077.2-201ENST00000623591 457 ntBASIC20.36■□□□□ 0.85
ATP6V0CP27449 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0CP27449 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
ATP6V0CP27449 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ATP6V0CP27449 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP6V0CP27449 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0CP27449 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP6V0CP27449 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0CP27449 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0CP27449 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0CP27449 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ATP6V0CP27449 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP6V0CP27449 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0CP27449 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0CP27449 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0CP27449 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0CP27449 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V0CP27449 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATP6V0CP27449 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATP6V0CP27449 WASH5P-204ENST00000632292 975 ntBASIC20.31■□□□□ 0.84
ATP6V0CP27449 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms