Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.36■■■□□ 2.77
KCNA3P22001 ATP5G2P3-201ENST00000429083 425 ntBASIC32.35■■■□□ 2.77
KCNA3P22001 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
KCNA3P22001 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
KCNA3P22001 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.34■■■□□ 2.77
KCNA3P22001 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
KCNA3P22001 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
KCNA3P22001 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
KCNA3P22001 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.33■■■□□ 2.77
KCNA3P22001 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.33■■■□□ 2.77
KCNA3P22001 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
KCNA3P22001 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
KCNA3P22001 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.31■■■□□ 2.76
KCNA3P22001 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
KCNA3P22001 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNA3P22001 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.3■■■□□ 2.76
KCNA3P22001 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNA3P22001 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNA3P22001 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNA3P22001 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
KCNA3P22001 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
KCNA3P22001 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.27■■■□□ 2.76
KCNA3P22001 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.26■■■□□ 2.76
KCNA3P22001 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
KCNA3P22001 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
KCNA3P22001 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.25■■■□□ 2.75
KCNA3P22001 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.25■■■□□ 2.75
KCNA3P22001 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
KCNA3P22001 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.25■■■□□ 2.75
KCNA3P22001 AC010864.1-201ENST00000609407 1511 ntBASIC32.25■■■□□ 2.75
KCNA3P22001 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.24■■■□□ 2.75
KCNA3P22001 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
KCNA3P22001 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.23■■■□□ 2.75
KCNA3P22001 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
KCNA3P22001 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
KCNA3P22001 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.22■■■□□ 2.75
KCNA3P22001 AC092296.2-201ENST00000589470 999 ntBASIC32.22■■■□□ 2.75
KCNA3P22001 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.22■■■□□ 2.75
KCNA3P22001 AL161658.1-201ENST00000623641 1967 ntBASIC32.21■■■□□ 2.75
KCNA3P22001 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.21■■■□□ 2.75
KCNA3P22001 AC148477.6-201ENST00000623746 465 ntBASIC32.21■■■□□ 2.75
KCNA3P22001 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
KCNA3P22001 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
KCNA3P22001 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.2■■■□□ 2.75
KCNA3P22001 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.2■■■□□ 2.75
KCNA3P22001 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
KCNA3P22001 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.2■■■□□ 2.74
KCNA3P22001 WHAMMP2-203ENST00000563942 1603 ntBASIC32.18■■■□□ 2.74
KCNA3P22001 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
KCNA3P22001 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
KCNA3P22001 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
KCNA3P22001 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
KCNA3P22001 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.17■■■□□ 2.74
KCNA3P22001 AC135983.2-203ENST00000454486 1613 ntBASIC32.17■■■□□ 2.74
KCNA3P22001 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
KCNA3P22001 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
KCNA3P22001 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.16■■■□□ 2.74
KCNA3P22001 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
KCNA3P22001 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
KCNA3P22001 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
KCNA3P22001 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.14■■■□□ 2.74
KCNA3P22001 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
KCNA3P22001 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
KCNA3P22001 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.13■■■□□ 2.73
KCNA3P22001 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
KCNA3P22001 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC32.12■■■□□ 2.73
KCNA3P22001 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
KCNA3P22001 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
KCNA3P22001 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
KCNA3P22001 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
KCNA3P22001 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.11■■■□□ 2.73
KCNA3P22001 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.11■■■□□ 2.73
KCNA3P22001 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
KCNA3P22001 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
KCNA3P22001 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.1■■■□□ 2.73
KCNA3P22001 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
KCNA3P22001 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
KCNA3P22001 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
KCNA3P22001 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
KCNA3P22001 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.08■■■□□ 2.73
KCNA3P22001 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
KCNA3P22001 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
KCNA3P22001 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
KCNA3P22001 AC110285.7-201ENST00000624417 1536 ntBASIC32.07■■■□□ 2.72
KCNA3P22001 ECEL1P2-201ENST00000461596 1295 ntBASIC32.07■■■□□ 2.72
KCNA3P22001 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
KCNA3P22001 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
KCNA3P22001 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
KCNA3P22001 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.06■■■□□ 2.72
KCNA3P22001 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
KCNA3P22001 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
KCNA3P22001 MIR219A2-201ENST00000608502 1504 ntBASIC32.05■■■□□ 2.72
KCNA3P22001 AC127502.1-201ENST00000399971 1502 ntBASIC32.04■■■□□ 2.72
KCNA3P22001 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
KCNA3P22001 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
KCNA3P22001 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.03■■■□□ 2.72
KCNA3P22001 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
KCNA3P22001 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
KCNA3P22001 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
KCNA3P22001 AL035685.1-201ENST00000636663 812 ntBASIC32.02■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms