Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 TAT2YOL020W 1779 nt7.51□□□□□ -1.21
TY1A-ER1P0CX71 snR57snR57 88 nt7.5□□□□□ -1.21
TY1A-ER1P0CX71 YKR075CYKR075C 924 nt7.5□□□□□ -1.21
TY1A-ER1P0CX71 AKR2YOR034C 2250 nt7.49□□□□□ -1.21
TY1A-ER1P0CX71 EAF5YEL018W 840 nt7.49□□□□□ -1.21
TY1A-ER1P0CX71 VPS75YNL246W 795 nt7.49□□□□□ -1.21
TY1A-ER1P0CX71 ISA2YPR067W 558 nt7.49□□□□□ -1.21
TY1A-ER1P0CX71 POP2YNR052C 1302 nt7.49□□□□□ -1.21
TY1A-ER1P0CX71 APM4YOL062C 1476 nt7.49□□□□□ -1.21
TY1A-ER1P0CX71 OXA1YER154W 1209 nt7.48□□□□□ -1.21
TY1A-ER1P0CX71 YLR046CYLR046C 813 nt7.48□□□□□ -1.21
TY1A-ER1P0CX71 SFL1YOR140W 2301 nt7.48□□□□□ -1.21
TY1A-ER1P0CX71 ELP3YPL086C 1674 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 CLB4YLR210W 1383 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 UBP13YBL067C 2244 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 MSF1YPR047W 1410 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 RAM1YDL090C 1296 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 SAM2YDR502C 1155 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 YHR022CYHR022C 771 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 DSC2YOL073C 969 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 HEM15YOR176W 1182 nt7.47□□□□□ -1.21
TY1A-ER1P0CX71 ECM27YJR106W 2178 nt7.46□□□□□ -1.21
TY1A-ER1P0CX71 SEC61YLR378C 1443 nt7.46□□□□□ -1.21
TY1A-ER1P0CX71 YCR006CYCR006C 474 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 YDL158CYDL158C 309 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 INH1YDL181W 258 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 MTQ1YNL063W 945 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 SLX1YBR228W 915 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 TOM71YHR117W 1920 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 ALP1YNL270C 1722 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 TRP2YER090W 1524 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 HER2YMR293C 1395 nt7.46□□□□□ -1.22
TY1A-ER1P0CX71 HXT11YOL156W 1704 nt7.45□□□□□ -1.22
TY1A-ER1P0CX71 YGR066CYGR066C 879 nt7.45□□□□□ -1.22
TY1A-ER1P0CX71 LAS17YOR181W 1902 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 SGV1YPR161C 1974 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 CIT3YPR001W 1461 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 PRP40YKL012W 1752 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 TDH1YJL052W 999 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 VTA1YLR181C 993 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 ALG5YPL227C 1005 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 UBS1YBR165W 834 nt7.44□□□□□ -1.22
TY1A-ER1P0CX71 YFL066CYFL066C 1179 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 YGR291CYGR291C 222 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 YNL190WYNL190W 615 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 PCL1YNL289W 840 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 ORT1YOR130C 879 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 ECM2YBR065C 1095 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 YBR298C-AYBR298C-A 222 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 snR4snR4 186 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 SRM1YGL097W 1449 nt7.43□□□□□ -1.22
TY1A-ER1P0CX71 MET30YIL046W 1923 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 FUB1YCR076C 753 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 TRP4YDR354W 1143 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 YHR054CYHR054C 1065 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 SPO12YHR152W 522 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 MET28YIR017C 564 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 MRPL8YJL063C 717 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 LIP2YLR239C 987 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 MRP7YNL005C 1116 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 VMA11YPL234C 495 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 YPL245WYPL245W 1365 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 RKM4YDR257C 1485 nt7.42□□□□□ -1.22
TY1A-ER1P0CX71 YDR401WYDR401W 564 nt7.41□□□□□ -1.22
TY1A-ER1P0CX71 VAR1Q0140 1197 nt7.41□□□□□ -1.22
TY1A-ER1P0CX71 TAZ1YPR140W 1146 nt7.41□□□□□ -1.22
TY1A-ER1P0CX71 TSC10YBR265W 963 nt7.41□□□□□ -1.22
TY1A-ER1P0CX71 CLB5YPR120C 1308 nt7.41□□□□□ -1.22
TY1A-ER1P0CX71 THI6YPL214C 1623 nt7.41□□□□□ -1.22
TY1A-ER1P0CX71 YDL129WYDL129W 876 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 tE(CUC)DtE(CUC)D 72 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 tE(CUC)ItE(CUC)I 72 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 OPI1YHL020C 1215 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 YLR169WYLR169W 354 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 YLR198CYLR198C 360 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 MRPS8YMR158W 468 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 YNL194CYNL194C 906 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 MSO1YNR049C 633 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 SNX3YOR357C 489 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 RTG3YBL103C 1461 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 ENP1YBR247C 1452 nt7.4□□□□□ -1.22
TY1A-ER1P0CX71 YGL235WYGL235W 537 nt7.39□□□□□ -1.23
TY1A-ER1P0CX71 ENT4YLL038C 744 nt7.39□□□□□ -1.23
TY1A-ER1P0CX71 PPA2YMR267W 933 nt7.39□□□□□ -1.23
TY1A-ER1P0CX71 SSP2YOR242C 1116 nt7.39□□□□□ -1.23
TY1A-ER1P0CX71 CDC16YKL022C 2523 nt7.39□□□□□ -1.23
TY1A-ER1P0CX71 CTF18YMR078C 2226 nt7.39□□□□□ -1.23
TY1A-ER1P0CX71 ADE16YLR028C 1776 nt7.38□□□□□ -1.23
TY1A-ER1P0CX71 KRR1YCL059C 951 nt7.38□□□□□ -1.23
TY1A-ER1P0CX71 TIF2YJL138C 1188 nt7.38□□□□□ -1.23
TY1A-ER1P0CX71 TIF1YKR059W 1188 nt7.38□□□□□ -1.23
TY1A-ER1P0CX71 YOL024WYOL024W 519 nt7.38□□□□□ -1.23
TY1A-ER1P0CX71 PMA2YPL036W 2844 nt7.38□□□□□ -1.23
TY1A-ER1P0CX71 CLD1YGR110W 1338 nt7.37□□□□□ -1.23
TY1A-ER1P0CX71 BNI5YNL166C 1347 nt7.37□□□□□ -1.23
TY1A-ER1P0CX71 YDR455CYDR455C 309 nt7.37□□□□□ -1.23
TY1A-ER1P0CX71 YER188WYER188W 720 nt7.37□□□□□ -1.23
TY1A-ER1P0CX71 INM1YHR046C 888 nt7.37□□□□□ -1.23
TY1A-ER1P0CX71 PFS2YNL317W 1398 nt7.36□□□□□ -1.23
TY1A-ER1P0CX71 RMD5YDR255C 1266 nt7.36□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms