Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SNRPA1P09661 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SNRPA1P09661 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SNRPA1P09661 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SNRPA1P09661 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
SNRPA1P09661 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
SNRPA1P09661 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC33.16■■■□□ 2.9
SNRPA1P09661 AC008813.1-201ENST00000536597 885 ntBASIC33.16■■■□□ 2.9
SNRPA1P09661 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC33.16■■■□□ 2.9
SNRPA1P09661 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNRPA1P09661 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
SNRPA1P09661 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SNRPA1P09661 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SNRPA1P09661 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC33.14■■■□□ 2.9
SNRPA1P09661 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC33.14■■■□□ 2.9
SNRPA1P09661 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
SNRPA1P09661 TPT1-202ENST00000379055 948 ntTSL 2 BASIC33.14■■■□□ 2.9
SNRPA1P09661 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC33.14■■■□□ 2.9
SNRPA1P09661 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SNRPA1P09661 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SNRPA1P09661 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SNRPA1P09661 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
SNRPA1P09661 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
SNRPA1P09661 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC33.12■■■□□ 2.89
SNRPA1P09661 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
SNRPA1P09661 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNRPA1P09661 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNRPA1P09661 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
SNRPA1P09661 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC33.11■■■□□ 2.89
SNRPA1P09661 AC110285.7-201ENST00000624417 1536 ntBASIC33.11■■■□□ 2.89
SNRPA1P09661 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
SNRPA1P09661 GPX1-201ENST00000419349 1106 ntBASIC33.1■■■□□ 2.89
SNRPA1P09661 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
SNRPA1P09661 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
SNRPA1P09661 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SNRPA1P09661 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
SNRPA1P09661 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC33.09■■■□□ 2.89
SNRPA1P09661 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
SNRPA1P09661 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC33.08■■■□□ 2.89
SNRPA1P09661 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC33.08■■■□□ 2.89
SNRPA1P09661 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
SNRPA1P09661 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNRPA1P09661 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNRPA1P09661 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SNRPA1P09661 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC33.06■■■□□ 2.88
SNRPA1P09661 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC33.05■■■□□ 2.88
SNRPA1P09661 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC33.05■■■□□ 2.88
SNRPA1P09661 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
SNRPA1P09661 ST7-AS1-201ENST00000456775 1889 ntBASIC33.05■■■□□ 2.88
SNRPA1P09661 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SNRPA1P09661 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
SNRPA1P09661 RARRES2P2-201ENST00000394842 485 ntBASIC33.04■■■□□ 2.88
SNRPA1P09661 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SNRPA1P09661 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SNRPA1P09661 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.03■■■□□ 2.88
SNRPA1P09661 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
SNRPA1P09661 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SNRPA1P09661 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
SNRPA1P09661 CEP120-209ENST00000515110 606 ntTSL 3 BASIC33.01■■■□□ 2.87
SNRPA1P09661 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
SNRPA1P09661 MEST-211ENST00000437945 1455 ntTSL 5 BASIC33■■■□□ 2.87
SNRPA1P09661 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SNRPA1P09661 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33■■■□□ 2.87
SNRPA1P09661 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC33■■■□□ 2.87
SNRPA1P09661 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SNRPA1P09661 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.99■■■□□ 2.87
SNRPA1P09661 RNF126P1-201ENST00000567452 1320 ntBASIC32.99■■■□□ 2.87
SNRPA1P09661 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
SNRPA1P09661 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SNRPA1P09661 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SNRPA1P09661 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
SNRPA1P09661 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SNRPA1P09661 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SNRPA1P09661 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
SNRPA1P09661 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.97■■■□□ 2.87
SNRPA1P09661 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SNRPA1P09661 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SNRPA1P09661 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.97■■■□□ 2.87
SNRPA1P09661 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.97■■■□□ 2.87
SNRPA1P09661 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.97■■■□□ 2.87
SNRPA1P09661 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SNRPA1P09661 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.87
SNRPA1P09661 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
SNRPA1P09661 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.95■■■□□ 2.87
SNRPA1P09661 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.95■■■□□ 2.87
SNRPA1P09661 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
SNRPA1P09661 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
SNRPA1P09661 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.95■■■□□ 2.86
SNRPA1P09661 AC148477.6-201ENST00000623746 465 ntBASIC32.94■■■□□ 2.86
SNRPA1P09661 AC022413.1-201ENST00000624602 984 ntBASIC32.94■■■□□ 2.86
SNRPA1P09661 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
SNRPA1P09661 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
SNRPA1P09661 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.92■■■□□ 2.86
SNRPA1P09661 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.92■■■□□ 2.86
SNRPA1P09661 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
SNRPA1P09661 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SNRPA1P09661 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.92■■■□□ 2.86
SNRPA1P09661 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.91■■■□□ 2.86
SNRPA1P09661 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
SNRPA1P09661 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms