Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDGFBP01127 AL592295.1-201ENST00000400984 884 ntBASIC26.49■■□□□ 1.83
PDGFBP01127 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDGFBP01127 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
PDGFBP01127 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDGFBP01127 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDGFBP01127 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.48■■□□□ 1.83
PDGFBP01127 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PDGFBP01127 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.48■■□□□ 1.83
PDGFBP01127 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDGFBP01127 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.47■■□□□ 1.83
PDGFBP01127 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDGFBP01127 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
PDGFBP01127 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDGFBP01127 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.46■■□□□ 1.83
PDGFBP01127 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.46■■□□□ 1.83
PDGFBP01127 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDGFBP01127 AC019069.1-201ENST00000610008 1333 ntBASIC26.45■■□□□ 1.83
PDGFBP01127 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDGFBP01127 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDGFBP01127 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.44■■□□□ 1.82
PDGFBP01127 AL035685.1-201ENST00000636663 812 ntBASIC26.44■■□□□ 1.82
PDGFBP01127 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.43■■□□□ 1.82
PDGFBP01127 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDGFBP01127 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
PDGFBP01127 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDGFBP01127 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.42■■□□□ 1.82
PDGFBP01127 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDGFBP01127 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.41■■□□□ 1.82
PDGFBP01127 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDGFBP01127 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.4■■□□□ 1.82
PDGFBP01127 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.4■■□□□ 1.82
PDGFBP01127 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDGFBP01127 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
PDGFBP01127 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDGFBP01127 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDGFBP01127 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDGFBP01127 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PDGFBP01127 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDGFBP01127 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDGFBP01127 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
PDGFBP01127 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.39■■□□□ 1.82
PDGFBP01127 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.39■■□□□ 1.81
PDGFBP01127 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDGFBP01127 AC092296.2-201ENST00000589470 999 ntBASIC26.38■■□□□ 1.81
PDGFBP01127 AL451085.2-201ENST00000605085 799 ntBASIC26.38■■□□□ 1.81
PDGFBP01127 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
PDGFBP01127 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDGFBP01127 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDGFBP01127 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDGFBP01127 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PDGFBP01127 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDGFBP01127 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PDGFBP01127 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.36■■□□□ 1.81
PDGFBP01127 AC120057.4-201ENST00000624722 1615 ntBASIC26.35■■□□□ 1.81
PDGFBP01127 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDGFBP01127 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDGFBP01127 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDGFBP01127 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.34■■□□□ 1.81
PDGFBP01127 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.34■■□□□ 1.81
PDGFBP01127 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.34■■□□□ 1.81
PDGFBP01127 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDGFBP01127 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.33■■□□□ 1.81
PDGFBP01127 DUX4L18-201ENST00000553347 1267 ntBASIC26.33■■□□□ 1.81
PDGFBP01127 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDGFBP01127 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDGFBP01127 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.33■■□□□ 1.8
PDGFBP01127 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDGFBP01127 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PDGFBP01127 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.32■■□□□ 1.8
PDGFBP01127 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.32■■□□□ 1.8
PDGFBP01127 AC148477.6-201ENST00000623746 465 ntBASIC26.32■■□□□ 1.8
PDGFBP01127 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PDGFBP01127 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDGFBP01127 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDGFBP01127 WHAMMP2-203ENST00000563942 1603 ntBASIC26.3■■□□□ 1.8
PDGFBP01127 AC010864.1-201ENST00000609407 1511 ntBASIC26.29■■□□□ 1.8
PDGFBP01127 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFBP01127 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFBP01127 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.29■■□□□ 1.8
PDGFBP01127 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFBP01127 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFBP01127 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDGFBP01127 ECEL1P2-201ENST00000461596 1295 ntBASIC26.28■■□□□ 1.8
PDGFBP01127 AC129492.7-201ENST00000622992 756 ntBASIC26.28■■□□□ 1.8
PDGFBP01127 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PDGFBP01127 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
PDGFBP01127 AL161658.1-201ENST00000623641 1967 ntBASIC26.27■■□□□ 1.8
PDGFBP01127 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
PDGFBP01127 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFBP01127 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.26■■□□□ 1.79
PDGFBP01127 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFBP01127 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.25■■□□□ 1.79
PDGFBP01127 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PDGFBP01127 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDGFBP01127 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDGFBP01127 MIR219A2-201ENST00000608502 1504 ntBASIC26.24■■□□□ 1.79
PDGFBP01127 AC110285.7-201ENST00000624417 1536 ntBASIC26.24■■□□□ 1.79
PDGFBP01127 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDGFBP01127 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms