Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.52■■□□□ 1.36
TRAV17A0A0B4J275 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRAV17A0A0B4J275 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRAV17A0A0B4J275 RNF126P1-201ENST00000567452 1320 ntBASIC23.51■■□□□ 1.35
TRAV17A0A0B4J275 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV17A0A0B4J275 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV17A0A0B4J275 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 ABHD17AP5-201ENST00000580133 923 ntBASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
TRAV17A0A0B4J275 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 AC110285.7-201ENST00000624417 1536 ntBASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 AC022413.1-201ENST00000624602 984 ntBASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.44■■□□□ 1.34
TRAV17A0A0B4J275 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.44■■□□□ 1.34
TRAV17A0A0B4J275 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAV17A0A0B4J275 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
TRAV17A0A0B4J275 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV17A0A0B4J275 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAV17A0A0B4J275 AC148477.6-201ENST00000623746 465 ntBASIC23.38■■□□□ 1.33
TRAV17A0A0B4J275 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV17A0A0B4J275 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.34■■□□□ 1.33
TRAV17A0A0B4J275 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV17A0A0B4J275 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TRAV17A0A0B4J275 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
TRAV17A0A0B4J275 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TRAV17A0A0B4J275 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.33■■□□□ 1.33
TRAV17A0A0B4J275 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
TRAV17A0A0B4J275 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.32■■□□□ 1.32
TRAV17A0A0B4J275 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAV17A0A0B4J275 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 MIR219A2-201ENST00000608502 1504 ntBASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAV17A0A0B4J275 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAV17A0A0B4J275 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms