Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.52■■□□□ 1.36
TRAV17A0A0B4J275 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRAV17A0A0B4J275 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRAV17A0A0B4J275 RNF126P1-201ENST00000567452 1320 ntBASIC23.51■■□□□ 1.35
TRAV17A0A0B4J275 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRAV17A0A0B4J275 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV17A0A0B4J275 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV17A0A0B4J275 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV17A0A0B4J275 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 ABHD17AP5-201ENST00000580133 923 ntBASIC23.47■■□□□ 1.35
TRAV17A0A0B4J275 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.46■■□□□ 1.35
TRAV17A0A0B4J275 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
TRAV17A0A0B4J275 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 AC110285.7-201ENST00000624417 1536 ntBASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 AC022413.1-201ENST00000624602 984 ntBASIC23.45■■□□□ 1.34
TRAV17A0A0B4J275 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.44■■□□□ 1.34
TRAV17A0A0B4J275 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.44■■□□□ 1.34
TRAV17A0A0B4J275 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAV17A0A0B4J275 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
TRAV17A0A0B4J275 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV17A0A0B4J275 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV17A0A0B4J275 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV17A0A0B4J275 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAV17A0A0B4J275 AC148477.6-201ENST00000623746 465 ntBASIC23.38■■□□□ 1.33
TRAV17A0A0B4J275 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV17A0A0B4J275 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV17A0A0B4J275 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV17A0A0B4J275 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.34■■□□□ 1.33
TRAV17A0A0B4J275 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV17A0A0B4J275 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TRAV17A0A0B4J275 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
TRAV17A0A0B4J275 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TRAV17A0A0B4J275 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.33■■□□□ 1.33
TRAV17A0A0B4J275 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
TRAV17A0A0B4J275 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.32■■□□□ 1.32
TRAV17A0A0B4J275 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAV17A0A0B4J275 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV17A0A0B4J275 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV17A0A0B4J275 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TRAV17A0A0B4J275 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAV17A0A0B4J275 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 MIR219A2-201ENST00000608502 1504 ntBASIC23.27■■□□□ 1.32
TRAV17A0A0B4J275 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAV17A0A0B4J275 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAV17A0A0B4J275 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms