Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGCS2P54868 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HMGCS2P54868 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
HMGCS2P54868 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 A2MP1-204ENST00000566278 4130 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HMGCS2P54868 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 AC140479.3-201ENST00000418944 1126 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 AC007064.3-201ENST00000422608 359 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGCS2P54868 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCS2P54868 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCS2P54868 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCS2P54868 AC108751.3-201ENST00000461814 1020 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 RPL7AP10-201ENST00000481016 791 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 AC093840.1-201ENST00000511599 336 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCS2P54868 AC007066.2-202ENST00000566531 914 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 AC069061.3-201ENST00000582254 823 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 AC107993.1-201ENST00000591343 684 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCS2P54868 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCS2P54868 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCS2P54868 SMG1P6-201ENST00000532337 2930 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 CCT8P1-201ENST00000413611 1657 ntBASIC5.53□□□□□ -1.52
HMGCS2P54868 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCS2P54868 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGCS2P54868 AC002525.1-201ENST00000624392 1622 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 SAMMSON-210ENST00000641260 1308 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
HMGCS2P54868 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGCS2P54868 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
HMGCS2P54868 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGCS2P54868 RN7SKP16-201ENST00000410180 299 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AL591848.1-201ENST00000413092 322 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AC004975.1-201ENST00000428733 208 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGCS2P54868 NUTF2P7-201ENST00000453086 375 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AC079168.2-201ENST00000453977 416 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 PPIAP21-201ENST00000464473 501 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 RN7SL41P-201ENST00000476144 297 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 RNU6-709P-201ENST00000517257 104 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGCS2P54868 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGCS2P54868 AC084783.1-201ENST00000565846 910 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 MIR4675-201ENST00000577898 77 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AC023389.2-201ENST00000580031 955 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AC125494.2-201ENST00000602431 657 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AC021422.1-201ENST00000621212 473 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 AC004232.3-201ENST00000622977 525 ntBASIC5.52□□□□□ -1.53
HMGCS2P54868 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGCS2P54868 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCS2P54868 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGCS2P54868 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HMGCS2P54868 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HMGCS2P54868 MTCO1P46-201ENST00000451639 1491 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGCS2P54868 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS2P54868 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCS2P54868 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 MUC2-202ENST00000613187 4845 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.51□□□□□ -1.53
HMGCS2P54868 OR56B2P-202ENST00000641377 2453 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HMGCS2P54868 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS2P54868 AC004817.4-201ENST00000602396 3625 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCS2P54868 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS2P54868 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCS2P54868 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCS2P54868 AC023141.6-201ENST00000429418 337 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 NPM1P33-201ENST00000438918 872 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 AL162591.2-201ENST00000449634 317 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 RN7SL517P-201ENST00000462240 305 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 AC011276.1-201ENST00000469688 323 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 RPS26P24-201ENST00000497656 331 ntBASIC5.51□□□□□ -1.53
HMGCS2P54868 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms