Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 AL359396.1-201ENST00000623151 2376 ntBASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 ICE2P1-201ENST00000512800 1849 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 Y_RNA.132-201ENST00000363421 102 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 RNU6-777P-201ENST00000364265 104 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 RNU6-115P-201ENST00000364310 107 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 RNA5SP238-201ENST00000365464 120 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 SNORA3.1-201ENST00000408166 111 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 RNU6-373P-201ENST00000411247 98 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL355862.1-201ENST00000412705 353 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL662791.3-201ENST00000413771 776 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 MICG-208ENST00000416822 132 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 RBMY2KP-201ENST00000418221 992 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AKR1B10P1-201ENST00000425765 942 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC023347.2-201ENST00000433994 462 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 SNRPEP7-201ENST00000438350 220 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL356133.1-201ENST00000444762 372 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 CBWD4P-201ENST00000445695 655 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 MRPL50P4-201ENST00000446432 475 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 RPL7P19-201ENST00000469948 618 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC083798.1-201ENST00000472671 131 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC084878.1-201ENST00000480555 648 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC008040.4-201ENST00000494834 768 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 HIGD1AP6-201ENST00000521833 279 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC055876.1-202ENST00000567053 138 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC097381.3-201ENST00000608962 462 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL161734.1-201ENST00000609720 557 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL121782.1-201ENST00000611242 413 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL161931.1-201ENST00000612768 246 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AL603758.1-201ENST00000618654 241 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 uc_338.37-201ENST00000620113 186 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 MIR8089-201ENST00000620165 82 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 AC138649.5-201ENST00000637456 137 ntBASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHB11Q9Y5F2 MTCO1P9-201ENST00000505577 1534 ntBASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 SAMMSON-203ENST00000641005 2168 ntBASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHB11Q9Y5F2 AC079949.2-201ENST00000617117 2933 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 OR9K1P-201ENST00000326513 941 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RNU1-39P-201ENST00000383897 165 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RPL5P5-201ENST00000392009 893 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AL354719.1-201ENST00000406535 843 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SKP32-201ENST00000410167 303 ntBASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHB11Q9Y5F2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms