RNA–Protein interactions for RNA: ENST00000638040.1

CACNB4-270, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5 BASIC

Gene CACNB4, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-270ENST00000638040 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.15
CACNB4-270ENST00000638040 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
CACNB4-270ENST00000638040 NISCHQ9Y2I1 1504 aa15.11■□□□□ 0.01
CACNB4-270ENST00000638040 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
CACNB4-270ENST00000638040 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
CACNB4-270ENST00000638040 MYT1Q01538 1121 aa13.58□□□□□ -0.24
CACNB4-270ENST00000638040 SENP3Q9H4L4 574 aaPredicted RBP13.31□□□□□ -0.28
CACNB4-270ENST00000638040 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
CACNB4-270ENST00000638040 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
CACNB4-270ENST00000638040 HRCP23327 699 aa13.02□□□□□ -0.33
CACNB4-270ENST00000638040 CCDC180Q9P1Z9 1646 aa12.94□□□□□ -0.34
CACNB4-270ENST00000638040 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.37
CACNB4-270ENST00000638040 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
CACNB4-270ENST00000638040 ADRA2BP18089 450 aa12.53□□□□□ -0.4
CACNB4-270ENST00000638040 SCAF1Q9H7N4 1312 aaKnown RBP12.51□□□□□ -0.41
CACNB4-270ENST00000638040 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
CACNB4-270ENST00000638040 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
CACNB4-270ENST00000638040 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
CACNB4-270ENST00000638040 FOXD1Q16676 465 aa12.4□□□□□ -0.42
CACNB4-270ENST00000638040 SUPT5HO00267 1087 aaKnown RBP12.37□□□□□ -0.43
CACNB4-270ENST00000638040 PPARGC1BQ86YN6 1023 aaKnown RBP12.37□□□□□ -0.43
CACNB4-270ENST00000638040 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
CACNB4-270ENST00000638040 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.45
CACNB4-270ENST00000638040 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.46
CACNB4-270ENST00000638040 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
CACNB4-270ENST00000638040 KCNA4P22459 653 aa12.18□□□□□ -0.46
CACNB4-270ENST00000638040 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
CACNB4-270ENST00000638040 CENPBP07199 599 aaPredicted RBP12.15□□□□□ -0.46
CACNB4-270ENST00000638040 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
CACNB4-270ENST00000638040 MYO15BQ96JP2 1530 aa12.14□□□□□ -0.47
CACNB4-270ENST00000638040 APLP2Q06481 763 aa12.06□□□□□ -0.48
CACNB4-270ENST00000638040 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
CACNB4-270ENST00000638040 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
CACNB4-270ENST00000638040 ABCC9O60706 1549 aa12.01□□□□□ -0.49
CACNB4-270ENST00000638040 NACADO15069 1562 aa11.97□□□□□ -0.49
CACNB4-270ENST00000638040 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-270ENST00000638040 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.49
CACNB4-270ENST00000638040 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
CACNB4-270ENST00000638040 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
CACNB4-270ENST00000638040 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
CACNB4-270ENST00000638040 ANP32EQ9BTT0 268 aa11.85□□□□□ -0.51
CACNB4-270ENST00000638040 PIAS4Q8N2W9 510 aaPredicted RBP11.81□□□□□ -0.52
CACNB4-270ENST00000638040 RB1CC1Q8TDY2 1594 aa11.78□□□□□ -0.52
CACNB4-270ENST00000638040 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
CACNB4-270ENST00000638040 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
CACNB4-270ENST00000638040 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
CACNB4-270ENST00000638040 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
CACNB4-270ENST00000638040 WIZO95785 1651 aa11.66□□□□□ -0.54
CACNB4-270ENST00000638040 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
CACNB4-270ENST00000638040 LOC105371045A0A1W2PR82 267 aa11.63□□□□□ -0.55
CACNB4-270ENST00000638040 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
CACNB4-270ENST00000638040 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
CACNB4-270ENST00000638040 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
CACNB4-270ENST00000638040 SLC24A1O60721 1099 aa11.55□□□□□ -0.56
CACNB4-270ENST00000638040 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
CACNB4-270ENST00000638040 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
CACNB4-270ENST00000638040 SMARCA4P51532 1647 aa11.54□□□□□ -0.56
CACNB4-270ENST00000638040 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
CACNB4-270ENST00000638040 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
CACNB4-270ENST00000638040 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
CACNB4-270ENST00000638040 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
CACNB4-270ENST00000638040 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
CACNB4-270ENST00000638040 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
CACNB4-270ENST00000638040 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
CACNB4-270ENST00000638040 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
CACNB4-270ENST00000638040 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
CACNB4-270ENST00000638040 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
CACNB4-270ENST00000638040 UBE2Q2Q8WVN8 375 aa11.37□□□□□ -0.59
CACNB4-270ENST00000638040 PEG3Q9GZU2 1588 aa11.36□□□□□ -0.59
CACNB4-270ENST00000638040 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
CACNB4-270ENST00000638040 ERICH6BQ5W0A0 696 aa11.33□□□□□ -0.6
CACNB4-270ENST00000638040 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
CACNB4-270ENST00000638040 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
CACNB4-270ENST00000638040 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
CACNB4-270ENST00000638040 ZBTB22O15209 634 aa11.27□□□□□ -0.61
CACNB4-270ENST00000638040 ATAD2BQ9ULI0 1458 aa11.27□□□□□ -0.61
CACNB4-270ENST00000638040 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
CACNB4-270ENST00000638040 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
CACNB4-270ENST00000638040 ANO8Q9HCE9 1232 aaPredicted RBP11.22□□□□□ -0.61
CACNB4-270ENST00000638040 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
CACNB4-270ENST00000638040 CCER1Q8TC90 406 aaPredicted RBP11.2□□□□□ -0.62
CACNB4-270ENST00000638040 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
CACNB4-270ENST00000638040 SOGA1O94964 1423 aa11.2□□□□□ -0.62
CACNB4-270ENST00000638040 YTHDC1Q96MU7 727 aaKnown RBP11.18□□□□□ -0.62
CACNB4-270ENST00000638040 RUSC2Q8N2Y8 1516 aa11.16□□□□□ -0.62
CACNB4-270ENST00000638040 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.62
CACNB4-270ENST00000638040 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
CACNB4-270ENST00000638040 EEA1Q15075 1411 aa11.14□□□□□ -0.63
CACNB4-270ENST00000638040 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
CACNB4-270ENST00000638040 MIER1Q8N108 512 aa11.11□□□□□ -0.63
CACNB4-270ENST00000638040 RBM19Q9Y4C8 960 aaKnown RBP11.09□□□□□ -0.63
CACNB4-270ENST00000638040 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
CACNB4-270ENST00000638040 TNIKQ9UKE5 1360 aa11.09□□□□□ -0.63
CACNB4-270ENST00000638040 NCAPD3P42695 1498 aa11.09□□□□□ -0.63
CACNB4-270ENST00000638040 MSH5O43196 834 aa11.08□□□□□ -0.64
CACNB4-270ENST00000638040 HMGXB3Q12766 1538 aa11.08□□□□□ -0.64
CACNB4-270ENST00000638040 CEP162Q5TB80 1403 aa11.08□□□□□ -0.64
CACNB4-270ENST00000638040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
CACNB4-270ENST00000638040 DEKP35659 375 aaKnown RBP11.05□□□□□ -0.64
CACNB4-270ENST00000638040 GOLGA3Q08378 1498 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms