RNA–Protein interactions for RNA: ENST00000421825.1

AC004946.1-201, humanhuman

TSL 3 BASIC

Gene AC004946.1, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004946.1-201ENST00000421825 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
AC004946.1-201ENST00000421825 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
AC004946.1-201ENST00000421825 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
AC004946.1-201ENST00000421825 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
AC004946.1-201ENST00000421825 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
AC004946.1-201ENST00000421825 FOXD1Q16676 465 aa14.23□□□□□ -0.13
AC004946.1-201ENST00000421825 ADRA2BP18089 450 aa13.88□□□□□ -0.19
AC004946.1-201ENST00000421825 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
AC004946.1-201ENST00000421825 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
AC004946.1-201ENST00000421825 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
AC004946.1-201ENST00000421825 MSH5O43196 834 aa13.03□□□□□ -0.32
AC004946.1-201ENST00000421825 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
AC004946.1-201ENST00000421825 KCNA4P22459 653 aa12.93□□□□□ -0.34
AC004946.1-201ENST00000421825 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
AC004946.1-201ENST00000421825 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
AC004946.1-201ENST00000421825 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
AC004946.1-201ENST00000421825 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
AC004946.1-201ENST00000421825 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
AC004946.1-201ENST00000421825 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
AC004946.1-201ENST00000421825 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
AC004946.1-201ENST00000421825 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
AC004946.1-201ENST00000421825 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
AC004946.1-201ENST00000421825 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
AC004946.1-201ENST00000421825 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
AC004946.1-201ENST00000421825 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
AC004946.1-201ENST00000421825 ZBTB22O15209 634 aa11.9□□□□□ -0.5
AC004946.1-201ENST00000421825 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
AC004946.1-201ENST00000421825 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
AC004946.1-201ENST00000421825 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
AC004946.1-201ENST00000421825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
AC004946.1-201ENST00000421825 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
AC004946.1-201ENST00000421825 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
AC004946.1-201ENST00000421825 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
AC004946.1-201ENST00000421825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
AC004946.1-201ENST00000421825 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
AC004946.1-201ENST00000421825 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
AC004946.1-201ENST00000421825 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
AC004946.1-201ENST00000421825 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
AC004946.1-201ENST00000421825 APLP2Q06481 763 aa11.16□□□□□ -0.62
AC004946.1-201ENST00000421825 CACNB1Q02641 598 aaPredicted RBP11.1□□□□□ -0.63
AC004946.1-201ENST00000421825 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
AC004946.1-201ENST00000421825 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
AC004946.1-201ENST00000421825 SPINK5Q9NQ38 1064 aaPredicted RBP11.02□□□□□ -0.65
AC004946.1-201ENST00000421825 CAPN15O75808 1086 aa10.97□□□□□ -0.65
AC004946.1-201ENST00000421825 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
AC004946.1-201ENST00000421825 POLA2Q14181 598 aa10.85□□□□□ -0.67
AC004946.1-201ENST00000421825 FKBP8Q14318 412 aa10.85□□□□□ -0.67
AC004946.1-201ENST00000421825 ABCB7O75027 752 aa10.78□□□□□ -0.68
AC004946.1-201ENST00000421825 MKRN4PQ13434 485 aaPredicted RBP10.75□□□□□ -0.69
AC004946.1-201ENST00000421825 DSG3P32926 999 aa10.73□□□□□ -0.69
AC004946.1-201ENST00000421825 FBLN2P98095 1184 aa10.73□□□□□ -0.69
AC004946.1-201ENST00000421825 ZBTB12Q9Y330 459 aaPredicted RBP10.68□□□□□ -0.7
AC004946.1-201ENST00000421825 SPDYE4A6NLX3 237 aa10.62□□□□□ -0.71
AC004946.1-201ENST00000421825 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
AC004946.1-201ENST00000421825 PROM2Q8N271 834 aa10.48□□□□□ -0.73
AC004946.1-201ENST00000421825 SPDYE2BA6NHP3 402 aa10.41□□□□□ -0.74
AC004946.1-201ENST00000421825 SPDYE6P0CI01 402 aa10.41□□□□□ -0.74
AC004946.1-201ENST00000421825 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
AC004946.1-201ENST00000421825 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
AC004946.1-201ENST00000421825 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
AC004946.1-201ENST00000421825 SSUH2Q9Y2M2 353 aa10.36□□□□□ -0.75
AC004946.1-201ENST00000421825 AMER1Q5JTC6 1135 aaPredicted RBP10.29□□□□□ -0.76
AC004946.1-201ENST00000421825 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC004946.1-201ENST00000421825 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
AC004946.1-201ENST00000421825 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
AC004946.1-201ENST00000421825 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
AC004946.1-201ENST00000421825 POTEHQ6S545 545 aa10.19□□□□□ -0.78
AC004946.1-201ENST00000421825 STAG3Q9UJ98 1225 aa10.17□□□□□ -0.78
AC004946.1-201ENST00000421825 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
AC004946.1-201ENST00000421825 AKT1S1Q96B36 256 aa10.14□□□□□ -0.79
AC004946.1-201ENST00000421825 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
AC004946.1-201ENST00000421825 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
AC004946.1-201ENST00000421825 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
AC004946.1-201ENST00000421825 MIER1Q8N108 512 aa10.04□□□□□ -0.8
AC004946.1-201ENST00000421825 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
AC004946.1-201ENST00000421825 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
AC004946.1-201ENST00000421825 PLEKHG5O94827 1062 aa9.97□□□□□ -0.81
AC004946.1-201ENST00000421825 SPOCK2Q92563 424 aa9.97□□□□□ -0.81
AC004946.1-201ENST00000421825 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
AC004946.1-201ENST00000421825 PITPNM1O00562 1244 aa9.93□□□□□ -0.82
AC004946.1-201ENST00000421825 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
AC004946.1-201ENST00000421825 PKD2Q13563 968 aa9.88□□□□□ -0.83
AC004946.1-201ENST00000421825 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
AC004946.1-201ENST00000421825 MNX1P50219 401 aaPredicted RBP9.8□□□□□ -0.84
AC004946.1-201ENST00000421825 ECM2O94769 699 aaPredicted RBP9.78□□□□□ -0.84
AC004946.1-201ENST00000421825 CIZ1Q9ULV3 898 aaPredicted RBP9.78□□□□□ -0.84
AC004946.1-201ENST00000421825 NUBP1P53384 320 aa9.76□□□□□ -0.85
AC004946.1-201ENST00000421825 DCAF8L2P0C7V8 631 aa9.74□□□□□ -0.85
AC004946.1-201ENST00000421825 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
AC004946.1-201ENST00000421825 GSE1Q14687 1217 aa9.72□□□□□ -0.85
AC004946.1-201ENST00000421825 NPM1P06748 294 aaKnown RBP eCLIP9.71□□□□□ -0.86
AC004946.1-201ENST00000421825 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
AC004946.1-201ENST00000421825 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
AC004946.1-201ENST00000421825 DCAF8Q5TAQ9 597 aa9.69□□□□□ -0.86
AC004946.1-201ENST00000421825 RGL2O15211 777 aa9.68□□□□□ -0.86
AC004946.1-201ENST00000421825 PRKAR2AP13861 404 aaKnown RBP9.68□□□□□ -0.86
AC004946.1-201ENST00000421825 TRIM41Q8WV44 630 aa9.68□□□□□ -0.86
AC004946.1-201ENST00000421825 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
AC004946.1-201ENST00000421825 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
AC004946.1-201ENST00000421825 FARP1Q9Y4F1 1045 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms