Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPS17P8-201ENST00000434525 335 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 Z80107.2-201ENST00000445127 392 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AL645937.3-201ENST00000453647 936 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.69□□□□□ -1.5
NEDD4P46934 AC091868.1-201ENST00000508746 304 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.69□□□□□ -1.5
NEDD4P46934 PCNPP1-201ENST00000552501 511 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AC105129.1-201ENST00000560250 297 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.69□□□□□ -1.5
NEDD4P46934 UBE2FP2-201ENST00000566646 462 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 CYCSP40-201ENST00000575927 294 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 MIR5699-201ENST00000578903 90 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 SNORA74C-1-201ENST00000580726 201 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 BNIP3P32-201ENST00000600015 554 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AL121932.1-201ENST00000605542 214 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.69□□□□□ -1.5
NEDD4P46934 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AC022960.2-201ENST00000616300 666 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AC002044.3-201ENST00000623314 541 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
NEDD4P46934 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NEDD4P46934 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.68□□□□□ -1.5
NEDD4P46934 ARL4AP5-201ENST00000404372 599 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 OR51B3P-201ENST00000412287 913 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 AC114755.2-201ENST00000413520 361 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 TMBIM7P-201ENST00000418074 855 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 CYCSP11-201ENST00000436426 315 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.68□□□□□ -1.5
NEDD4P46934 TPT1P1-201ENST00000458495 518 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NEDD4P46934 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.68□□□□□ -1.5
NEDD4P46934 Y_RNA.719-201ENST00000517156 106 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 BUD31P1-201ENST00000521828 359 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 AC022784.5-201ENST00000522241 437 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.68□□□□□ -1.5
NEDD4P46934 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.68□□□□□ -1.5
NEDD4P46934 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.68□□□□□ -1.5
NEDD4P46934 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.68□□□□□ -1.5
NEDD4P46934 MIR3936-201ENST00000584304 110 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 AL512782.1-201ENST00000603093 364 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 AC100827.5-201ENST00000615883 426 ntBASIC5.68□□□□□ -1.5
NEDD4P46934 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD4P46934 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 AC010928.1-201ENST00000592477 1447 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD4P46934 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.67□□□□□ -1.5
NEDD4P46934 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
NEDD4P46934 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD4P46934 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.67□□□□□ -1.5
NEDD4P46934 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD4P46934 AC008549.2-201ENST00000333482 706 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NEDD4P46934 RNU1-82P-201ENST00000390851 165 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AL133270.1-201ENST00000402635 279 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 RBMY2KP-201ENST00000418221 992 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.67□□□□□ -1.5
NEDD4P46934 FABP7P1-201ENST00000424004 391 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AL049745.1-201ENST00000433953 286 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 RHEBP2-201ENST00000450289 600 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AC090686.1-201ENST00000481577 749 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.67□□□□□ -1.5
NEDD4P46934 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.67□□□□□ -1.5
NEDD4P46934 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.67□□□□□ -1.5
NEDD4P46934 RNU6-964P-201ENST00000516524 69 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AC133555.2-201ENST00000550213 292 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 SETP3-201ENST00000581726 813 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NEDD4P46934 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AL391358.1-201ENST00000605342 190 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AC012414.7-202ENST00000622705 1090 ntBASIC5.67□□□□□ -1.5
NEDD4P46934 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.67□□□□□ -1.5
NEDD4P46934 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD4P46934 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD4P46934 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD4P46934 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD4P46934 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NEDD4P46934 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms