RNA–Protein interactions for RNA: ENST00000333482.4

AC008549.2-201, humanhuman

BASIC

Gene AC008549.2, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008549.2-201ENST00000333482 AEBP2Q6ZN18 517 aaPredicted RBP32.33■■■□□ 2.77
AC008549.2-201ENST00000333482 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
AC008549.2-201ENST00000333482 SENP3Q9H4L4 574 aaPredicted RBP27.59■■■□□ 2.01
AC008549.2-201ENST00000333482 PHF23Q9BUL5 403 aaPredicted RBP27.2■■□□□ 1.94
AC008549.2-201ENST00000333482 FOXD1Q16676 465 aa25.78■■□□□ 1.72
AC008549.2-201ENST00000333482 MSH5O43196 834 aa24.21■■□□□ 1.47
AC008549.2-201ENST00000333482 POTEDQ86YR6 584 aa24.18■■□□□ 1.46
AC008549.2-201ENST00000333482 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
AC008549.2-201ENST00000333482 PIAS4Q8N2W9 510 aaPredicted RBP24.03■■□□□ 1.44
AC008549.2-201ENST00000333482 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
AC008549.2-201ENST00000333482 ADRA2BP18089 450 aa23.79■■□□□ 1.4
AC008549.2-201ENST00000333482 MAPK8IP2Q13387 824 aaPredicted RBP21.95■■□□□ 1.1
AC008549.2-201ENST00000333482 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.09
AC008549.2-201ENST00000333482 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
AC008549.2-201ENST00000333482 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
AC008549.2-201ENST00000333482 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.96
AC008549.2-201ENST00000333482 CACNB1Q02641 598 aaPredicted RBP21■□□□□ 0.95
AC008549.2-201ENST00000333482 HOXD11P31277 338 aaPredicted RBP20.89■□□□□ 0.93
AC008549.2-201ENST00000333482 CNKSR2Q8WXI2 1034 aa20.77■□□□□ 0.92
AC008549.2-201ENST00000333482 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
AC008549.2-201ENST00000333482 RNF39Q9H2S5 420 aa20.63■□□□□ 0.89
AC008549.2-201ENST00000333482 C1QBPQ07021 282 aaKnown RBP20.3■□□□□ 0.84
AC008549.2-201ENST00000333482 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
AC008549.2-201ENST00000333482 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
AC008549.2-201ENST00000333482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
AC008549.2-201ENST00000333482 NPM3O75607 178 aaKnown RBP19.94■□□□□ 0.78
AC008549.2-201ENST00000333482 U3KPZ7 1027 aaPredicted RBP19.49■□□□□ 0.71
AC008549.2-201ENST00000333482 SPINK5Q9NQ38 1064 aaPredicted RBP19.32■□□□□ 0.68
AC008549.2-201ENST00000333482 KCNA4P22459 653 aa19.31■□□□□ 0.68
AC008549.2-201ENST00000333482 CAPN15O75808 1086 aa19.3■□□□□ 0.68
AC008549.2-201ENST00000333482 DSG3P32926 999 aa19.23■□□□□ 0.67
AC008549.2-201ENST00000333482 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
AC008549.2-201ENST00000333482 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
AC008549.2-201ENST00000333482 POTEHQ6S545 545 aa18.89■□□□□ 0.61
AC008549.2-201ENST00000333482 ABCB7O75027 752 aa18.86■□□□□ 0.61
AC008549.2-201ENST00000333482 APLP2Q06481 763 aa18.86■□□□□ 0.61
AC008549.2-201ENST00000333482 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
AC008549.2-201ENST00000333482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
AC008549.2-201ENST00000333482 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
AC008549.2-201ENST00000333482 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
AC008549.2-201ENST00000333482 MYCNP04198 464 aaPredicted RBP18.43■□□□□ 0.54
AC008549.2-201ENST00000333482 POLA2Q14181 598 aa18.33■□□□□ 0.52
AC008549.2-201ENST00000333482 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
AC008549.2-201ENST00000333482 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
AC008549.2-201ENST00000333482 CHRDL2Q6WN34 429 aa18.09■□□□□ 0.49
AC008549.2-201ENST00000333482 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
AC008549.2-201ENST00000333482 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
AC008549.2-201ENST00000333482 ZBTB12Q9Y330 459 aaPredicted RBP17.89■□□□□ 0.45
AC008549.2-201ENST00000333482 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
AC008549.2-201ENST00000333482 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
AC008549.2-201ENST00000333482 ZBTB22O15209 634 aa17.76■□□□□ 0.43
AC008549.2-201ENST00000333482 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
AC008549.2-201ENST00000333482 PIP4P2Q8N4L2 257 aa17.59■□□□□ 0.41
AC008549.2-201ENST00000333482 SP7Q8TDD2 431 aaPredicted RBP17.56■□□□□ 0.4
AC008549.2-201ENST00000333482 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
AC008549.2-201ENST00000333482 ATXN8OSP0DMR3 200 aa17.5■□□□□ 0.39
AC008549.2-201ENST00000333482 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
AC008549.2-201ENST00000333482 HAX1O00165 279 aa17.37■□□□□ 0.37
AC008549.2-201ENST00000333482 FBLN2P98095 1184 aa17.36■□□□□ 0.37
AC008549.2-201ENST00000333482 SPDYE2BA6NHP3 402 aa17.32■□□□□ 0.36
AC008549.2-201ENST00000333482 SPDYE6P0CI01 402 aa17.32■□□□□ 0.36
AC008549.2-201ENST00000333482 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
AC008549.2-201ENST00000333482 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
AC008549.2-201ENST00000333482 EVX2Q03828 476 aa17.14■□□□□ 0.33
AC008549.2-201ENST00000333482 CLEC11AQ9Y240 323 aa17.14■□□□□ 0.33
AC008549.2-201ENST00000333482 SPDYE1Q8NFV5 336 aaPredicted RBP17.11■□□□□ 0.33
AC008549.2-201ENST00000333482 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
AC008549.2-201ENST00000333482 PRKAR2AP13861 404 aaKnown RBP17.08■□□□□ 0.32
AC008549.2-201ENST00000333482 SSUH2Q9Y2M2 353 aa17.07■□□□□ 0.32
AC008549.2-201ENST00000333482 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
AC008549.2-201ENST00000333482 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
AC008549.2-201ENST00000333482 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
AC008549.2-201ENST00000333482 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC008549.2-201ENST00000333482 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
AC008549.2-201ENST00000333482 GABBR2O75899 941 aa16.71■□□□□ 0.27
AC008549.2-201ENST00000333482 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
AC008549.2-201ENST00000333482 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
AC008549.2-201ENST00000333482 FARP1Q9Y4F1 1045 aaPredicted RBP16.53■□□□□ 0.24
AC008549.2-201ENST00000333482 LHX8Q68G74 356 aa16.46■□□□□ 0.23
AC008549.2-201ENST00000333482 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
AC008549.2-201ENST00000333482 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
AC008549.2-201ENST00000333482 CLCN6P51797 869 aa16.26■□□□□ 0.19
AC008549.2-201ENST00000333482 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
AC008549.2-201ENST00000333482 ZRANB1Q9UGI0 708 aa16.25■□□□□ 0.19
AC008549.2-201ENST00000333482 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
AC008549.2-201ENST00000333482 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
AC008549.2-201ENST00000333482 DCBLD2Q96PD2 775 aa16.21■□□□□ 0.19
AC008549.2-201ENST00000333482 GALR2O43603 387 aaPredicted RBP16.09■□□□□ 0.17
AC008549.2-201ENST00000333482 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
AC008549.2-201ENST00000333482 PHF12Q96QT6 1004 aa16.02■□□□□ 0.16
AC008549.2-201ENST00000333482 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
AC008549.2-201ENST00000333482 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
AC008549.2-201ENST00000333482 POTEB2H3BUK9 544 aa15.83■□□□□ 0.12
AC008549.2-201ENST00000333482 OTUD5Q96G74 571 aa15.82■□□□□ 0.12
AC008549.2-201ENST00000333482 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
AC008549.2-201ENST00000333482 MS4A3Q96HJ5 214 aa15.79■□□□□ 0.12
AC008549.2-201ENST00000333482 PROM2Q8N271 834 aa15.76■□□□□ 0.11
AC008549.2-201ENST00000333482 TSPYL2Q9H2G4 693 aaPredicted RBP15.73■□□□□ 0.11
AC008549.2-201ENST00000333482 ASTLQ6HA08 431 aaPredicted RBP15.7■□□□□ 0.1
AC008549.2-201ENST00000333482 PLSCR2Q9NRY7 297 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms