RNA–Protein interactions for RNA: ENST00000561362.1

AC015660.2-201, humanhuman

TSL 3 BASIC

Gene AC015660.2, Length 323 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC015660.2-201ENST00000561362 AEBP2Q6ZN18 517 aaPredicted RBP30.15■■■□□ 2.42
AC015660.2-201ENST00000561362 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
AC015660.2-201ENST00000561362 SENP3Q9H4L4 574 aaPredicted RBP25.55■■□□□ 1.68
AC015660.2-201ENST00000561362 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
AC015660.2-201ENST00000561362 FOXD1Q16676 465 aa23.99■■□□□ 1.43
AC015660.2-201ENST00000561362 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
AC015660.2-201ENST00000561362 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
AC015660.2-201ENST00000561362 MSH5O43196 834 aa22.37■■□□□ 1.17
AC015660.2-201ENST00000561362 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
AC015660.2-201ENST00000561362 PIAS4Q8N2W9 510 aaPredicted RBP22.3■■□□□ 1.16
AC015660.2-201ENST00000561362 ADRA2BP18089 450 aa22.21■■□□□ 1.15
AC015660.2-201ENST00000561362 MAPK8IP2Q13387 824 aaPredicted RBP20.52■□□□□ 0.88
AC015660.2-201ENST00000561362 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
AC015660.2-201ENST00000561362 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
AC015660.2-201ENST00000561362 PPP4R3CPQ6ZMV5 832 aa19.68■□□□□ 0.74
AC015660.2-201ENST00000561362 DCAF8L1A6NGE4 600 aa19.49■□□□□ 0.71
AC015660.2-201ENST00000561362 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
AC015660.2-201ENST00000561362 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
AC015660.2-201ENST00000561362 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
AC015660.2-201ENST00000561362 RNF216Q9NWF9 866 aaPredicted RBP19.18■□□□□ 0.66
AC015660.2-201ENST00000561362 RNF39Q9H2S5 420 aa19.16■□□□□ 0.66
AC015660.2-201ENST00000561362 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
AC015660.2-201ENST00000561362 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
AC015660.2-201ENST00000561362 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
AC015660.2-201ENST00000561362 NPM3O75607 178 aaKnown RBP18.61■□□□□ 0.57
AC015660.2-201ENST00000561362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
AC015660.2-201ENST00000561362 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
AC015660.2-201ENST00000561362 KCNA4P22459 653 aa18.08■□□□□ 0.48
AC015660.2-201ENST00000561362 SPINK5Q9NQ38 1064 aaPredicted RBP18.02■□□□□ 0.48
AC015660.2-201ENST00000561362 CAPN15O75808 1086 aa17.9■□□□□ 0.46
AC015660.2-201ENST00000561362 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
AC015660.2-201ENST00000561362 DSG3P32926 999 aa17.88■□□□□ 0.45
AC015660.2-201ENST00000561362 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
AC015660.2-201ENST00000561362 ABCB7O75027 752 aa17.56■□□□□ 0.4
AC015660.2-201ENST00000561362 POTEHQ6S545 545 aa17.47■□□□□ 0.39
AC015660.2-201ENST00000561362 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
AC015660.2-201ENST00000561362 APLP2Q06481 763 aa17.36■□□□□ 0.37
AC015660.2-201ENST00000561362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
AC015660.2-201ENST00000561362 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
AC015660.2-201ENST00000561362 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
AC015660.2-201ENST00000561362 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
AC015660.2-201ENST00000561362 POLA2Q14181 598 aa17.06■□□□□ 0.32
AC015660.2-201ENST00000561362 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
AC015660.2-201ENST00000561362 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
AC015660.2-201ENST00000561362 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
AC015660.2-201ENST00000561362 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
AC015660.2-201ENST00000561362 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
AC015660.2-201ENST00000561362 ZBTB22O15209 634 aa16.69■□□□□ 0.26
AC015660.2-201ENST00000561362 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
AC015660.2-201ENST00000561362 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
AC015660.2-201ENST00000561362 ZBTB12Q9Y330 459 aaPredicted RBP16.51■□□□□ 0.23
AC015660.2-201ENST00000561362 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
AC015660.2-201ENST00000561362 PIP4P2Q8N4L2 257 aa16.36■□□□□ 0.21
AC015660.2-201ENST00000561362 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
AC015660.2-201ENST00000561362 ATXN8OSP0DMR3 200 aa16.25■□□□□ 0.19
AC015660.2-201ENST00000561362 SP7Q8TDD2 431 aaPredicted RBP16.25■□□□□ 0.19
AC015660.2-201ENST00000561362 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
AC015660.2-201ENST00000561362 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
AC015660.2-201ENST00000561362 HAX1O00165 279 aa16.09■□□□□ 0.17
AC015660.2-201ENST00000561362 FBLN2P98095 1184 aa16.06■□□□□ 0.16
AC015660.2-201ENST00000561362 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
AC015660.2-201ENST00000561362 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
AC015660.2-201ENST00000561362 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
AC015660.2-201ENST00000561362 EVX2Q03828 476 aa16.03■□□□□ 0.16
AC015660.2-201ENST00000561362 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
AC015660.2-201ENST00000561362 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
AC015660.2-201ENST00000561362 SSUH2Q9Y2M2 353 aa15.87■□□□□ 0.13
AC015660.2-201ENST00000561362 PRKAR2AP13861 404 aaKnown RBP15.86■□□□□ 0.13
AC015660.2-201ENST00000561362 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
AC015660.2-201ENST00000561362 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
AC015660.2-201ENST00000561362 C19orf67A6NJJ6 358 aa15.67■□□□□ 0.1
AC015660.2-201ENST00000561362 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
AC015660.2-201ENST00000561362 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
AC015660.2-201ENST00000561362 PRR29P0C7W0 189 aa15.56■□□□□ 0.08
AC015660.2-201ENST00000561362 GABBR2O75899 941 aa15.53■□□□□ 0.08
AC015660.2-201ENST00000561362 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
AC015660.2-201ENST00000561362 CD44P16070 742 aaKnown RBP15.33■□□□□ 0.04
AC015660.2-201ENST00000561362 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
AC015660.2-201ENST00000561362 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
AC015660.2-201ENST00000561362 LHX8Q68G74 356 aa15.25■□□□□ 0.03
AC015660.2-201ENST00000561362 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
AC015660.2-201ENST00000561362 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
AC015660.2-201ENST00000561362 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
AC015660.2-201ENST00000561362 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
AC015660.2-201ENST00000561362 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
AC015660.2-201ENST00000561362 GALR2O43603 387 aaPredicted RBP14.99□□□□□ -0.01
AC015660.2-201ENST00000561362 DCBLD2Q96PD2 775 aa14.98□□□□□ -0.01
AC015660.2-201ENST00000561362 CLCN6P51797 869 aa14.95□□□□□ -0.02
AC015660.2-201ENST00000561362 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
AC015660.2-201ENST00000561362 PHF12Q96QT6 1004 aa14.93□□□□□ -0.02
AC015660.2-201ENST00000561362 POTEB2H3BUK9 544 aa14.8□□□□□ -0.04
AC015660.2-201ENST00000561362 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
AC015660.2-201ENST00000561362 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
AC015660.2-201ENST00000561362 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
AC015660.2-201ENST00000561362 PROM2Q8N271 834 aa14.72□□□□□ -0.05
AC015660.2-201ENST00000561362 OTUD5Q96G74 571 aa14.72□□□□□ -0.05
AC015660.2-201ENST00000561362 MS4A3Q96HJ5 214 aa14.69□□□□□ -0.06
AC015660.2-201ENST00000561362 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
AC015660.2-201ENST00000561362 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
AC015660.2-201ENST00000561362 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms