Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 NDUFB4P4-201ENST00000404822 243 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SKP296-201ENST00000411185 341 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PCNPP4-201ENST00000414817 517 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SLC35E1P1-201ENST00000419313 864 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC006065.1-201ENST00000422539 802 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ELOCP6-201ENST00000429066 328 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 USP9YP31-201ENST00000431405 881 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL954705.1-201ENST00000435277 559 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC019185.1-201ENST00000442718 389 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ELOCP12-201ENST00000458706 328 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RPL7L1P8-201ENST00000469911 741 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SL429P-201ENST00000479090 223 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SL489P-201ENST00000486185 223 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SL327P-201ENST00000488659 223 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR4G11P-201ENST00000492842 939 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC021193.1-201ENST00000511607 420 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNA5SP143-201ENST00000516936 115 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 HMGB1P42-201ENST00000532126 553 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ARL6IP1P1-201ENST00000545836 610 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC013283.1-201ENST00000557282 492 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR4G1P-201ENST00000588632 938 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC119403.2-201ENST00000590960 598 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SL853P-201ENST00000617250 223 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL138955.1-201ENST00000622881 1040 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AP002799.1-201ENST00000623552 423 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC099654.10-201ENST00000640395 161 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC024560.2-201ENST00000507981 1497 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CCND2-201ENST00000261254 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNA5SP305-201ENST00000362665 119 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RPL23AP18-201ENST00000416139 468 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RPL36P1-201ENST00000419720 225 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC241584.1-201ENST00000438469 1241 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC005008.1-201ENST00000456151 612 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 IGBP1P1-201ENST00000554337 1009 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL049779.3-201ENST00000557141 606 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SL208P-201ENST00000577964 296 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MIR4715-201ENST00000584117 79 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC121761.2-201ENST00000617300 689 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC078880.5-201ENST00000617845 421 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms