RNA–Protein interactions for RNA: ENST00000555490.1

AL352955.1-201, humanhuman

TSL 3 BASIC

Gene AL352955.1, Length 332 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL352955.1-201ENST00000555490 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
AL352955.1-201ENST00000555490 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
AL352955.1-201ENST00000555490 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
AL352955.1-201ENST00000555490 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
AL352955.1-201ENST00000555490 FOXD1Q16676 465 aa17.65■□□□□ 0.42
AL352955.1-201ENST00000555490 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
AL352955.1-201ENST00000555490 MSH5O43196 834 aa16.72■□□□□ 0.27
AL352955.1-201ENST00000555490 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
AL352955.1-201ENST00000555490 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
AL352955.1-201ENST00000555490 ADRA2BP18089 450 aa16■□□□□ 0.15
AL352955.1-201ENST00000555490 PLPPR3Q6T4P5 718 aa15.96■□□□□ 0.15
AL352955.1-201ENST00000555490 MAPK8IP2Q13387 824 aaPredicted RBP14.88□□□□□ -0.03
AL352955.1-201ENST00000555490 DMRT2Q9Y5R5 561 aa14.85□□□□□ -0.03
AL352955.1-201ENST00000555490 CACNB1Q02641 598 aaPredicted RBP14.74□□□□□ -0.05
AL352955.1-201ENST00000555490 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
AL352955.1-201ENST00000555490 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
AL352955.1-201ENST00000555490 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
AL352955.1-201ENST00000555490 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
AL352955.1-201ENST00000555490 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
AL352955.1-201ENST00000555490 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
AL352955.1-201ENST00000555490 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
AL352955.1-201ENST00000555490 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
AL352955.1-201ENST00000555490 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
AL352955.1-201ENST00000555490 POTEHQ6S545 545 aa13.47□□□□□ -0.25
AL352955.1-201ENST00000555490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
AL352955.1-201ENST00000555490 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
AL352955.1-201ENST00000555490 DSG3P32926 999 aa13.13□□□□□ -0.31
AL352955.1-201ENST00000555490 CAPN15O75808 1086 aa13.09□□□□□ -0.31
AL352955.1-201ENST00000555490 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
AL352955.1-201ENST00000555490 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
AL352955.1-201ENST00000555490 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
AL352955.1-201ENST00000555490 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
AL352955.1-201ENST00000555490 ABCB7O75027 752 aa12.74□□□□□ -0.37
AL352955.1-201ENST00000555490 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
AL352955.1-201ENST00000555490 APLP2Q06481 763 aa12.62□□□□□ -0.39
AL352955.1-201ENST00000555490 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
AL352955.1-201ENST00000555490 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
AL352955.1-201ENST00000555490 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
AL352955.1-201ENST00000555490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
AL352955.1-201ENST00000555490 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
AL352955.1-201ENST00000555490 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
AL352955.1-201ENST00000555490 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
AL352955.1-201ENST00000555490 KCNA4P22459 653 aa12.28□□□□□ -0.44
AL352955.1-201ENST00000555490 POLA2Q14181 598 aa12.27□□□□□ -0.45
AL352955.1-201ENST00000555490 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
AL352955.1-201ENST00000555490 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
AL352955.1-201ENST00000555490 HAX1O00165 279 aa12.05□□□□□ -0.48
AL352955.1-201ENST00000555490 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
AL352955.1-201ENST00000555490 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
AL352955.1-201ENST00000555490 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
AL352955.1-201ENST00000555490 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
AL352955.1-201ENST00000555490 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
AL352955.1-201ENST00000555490 OSCARQ8IYS5 282 aa11.89□□□□□ -0.51
AL352955.1-201ENST00000555490 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
AL352955.1-201ENST00000555490 EVX2Q03828 476 aa11.85□□□□□ -0.51
AL352955.1-201ENST00000555490 FOXD4L1Q9NU39 408 aa11.61□□□□□ -0.55
AL352955.1-201ENST00000555490 PRKAR2AP13861 404 aaKnown RBP11.6□□□□□ -0.55
AL352955.1-201ENST00000555490 LHX8Q68G74 356 aa11.59□□□□□ -0.55
AL352955.1-201ENST00000555490 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
AL352955.1-201ENST00000555490 GABBR2O75899 941 aa11.53□□□□□ -0.56
AL352955.1-201ENST00000555490 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
AL352955.1-201ENST00000555490 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
AL352955.1-201ENST00000555490 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
AL352955.1-201ENST00000555490 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.57
AL352955.1-201ENST00000555490 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
AL352955.1-201ENST00000555490 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
AL352955.1-201ENST00000555490 FBLN2P98095 1184 aa11.42□□□□□ -0.58
AL352955.1-201ENST00000555490 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
AL352955.1-201ENST00000555490 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
AL352955.1-201ENST00000555490 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
AL352955.1-201ENST00000555490 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
AL352955.1-201ENST00000555490 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
AL352955.1-201ENST00000555490 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
AL352955.1-201ENST00000555490 ZBTB22O15209 634 aa11.27□□□□□ -0.61
AL352955.1-201ENST00000555490 MKRN4PQ13434 485 aaPredicted RBP11.26□□□□□ -0.61
AL352955.1-201ENST00000555490 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
AL352955.1-201ENST00000555490 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
AL352955.1-201ENST00000555490 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
AL352955.1-201ENST00000555490 CLCN6P51797 869 aa11.11□□□□□ -0.63
AL352955.1-201ENST00000555490 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
AL352955.1-201ENST00000555490 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
AL352955.1-201ENST00000555490 OTUD5Q96G74 571 aa10.98□□□□□ -0.65
AL352955.1-201ENST00000555490 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
AL352955.1-201ENST00000555490 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
AL352955.1-201ENST00000555490 POTEMA6NI47 508 aa10.94□□□□□ -0.66
AL352955.1-201ENST00000555490 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
AL352955.1-201ENST00000555490 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
AL352955.1-201ENST00000555490 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
AL352955.1-201ENST00000555490 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
AL352955.1-201ENST00000555490 PCDH10Q9P2E7 1040 aa10.77□□□□□ -0.69
AL352955.1-201ENST00000555490 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
AL352955.1-201ENST00000555490 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
AL352955.1-201ENST00000555490 PHF12Q96QT6 1004 aa10.75□□□□□ -0.69
AL352955.1-201ENST00000555490 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
AL352955.1-201ENST00000555490 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
AL352955.1-201ENST00000555490 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
AL352955.1-201ENST00000555490 METRNQ9UJH8 293 aa10.66□□□□□ -0.7
AL352955.1-201ENST00000555490 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
AL352955.1-201ENST00000555490 C7P10643 843 aa10.62□□□□□ -0.71
AL352955.1-201ENST00000555490 MAMSTRQ6ZN01 415 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms