Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AP3B2-201ENST00000261722 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 DLGAP1-AS5-202ENST00000565811 2594 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 NRF1-203ENST00000353868 3568 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 MPP2-218ENST00000536246 4351 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 UHRF2P1-201ENST00000431339 2387 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 TYW1-207ENST00000615572 3156 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC01854-201ENST00000375987 2213 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 OGFRP1-201ENST00000332965 1242 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-1209P-201ENST00000363655 107 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 LDHAP5-201ENST00000394996 622 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC012306.1-201ENST00000423267 114 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 TBC1D3P7-201ENST00000428328 914 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 H2AFZP5-201ENST00000446960 382 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 NDUFS5P3-201ENST00000450668 321 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 GPAA1P1-201ENST00000453019 931 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 ANP32BP2-201ENST00000454525 545 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 SNRPGP7-201ENST00000469016 106 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 RPL3P6-201ENST00000474162 1204 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SL60P-201ENST00000476209 299 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 RPS29P2-201ENST00000479278 136 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC026412.1-206ENST00000502273 206 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 KRT19P3-201ENST00000507547 828 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 RNA5SP408-201ENST00000516115 100 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 RNY4P20-201ENST00000516678 93 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC067930.1-201ENST00000517300 291 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AP004607.1-201ENST00000524456 203 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR4309-201ENST00000582498 83 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 PHF5CP-201ENST00000591298 325 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC009955.3-201ENST00000596829 448 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AL122127.1-201ENST00000603832 327 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC012498.2-201ENST00000604586 372 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR7704-201ENST00000610524 59 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 FAS-AS1.1-201ENST00000615327 126 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC007546.2-201ENST00000623996 360 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC073592.9-201ENST00000624885 371 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR548BB-201ENST00000626714 66 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 KLHL32-204ENST00000536676 3699 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 AC010889.1-201ENST00000566193 2666 ntBASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 MTFR1-201ENST00000262146 2640 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 DHX37-206ENST00000544745 4112 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP3-3Q9BYR6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 GALNTL6-204ENST00000508122 1755 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 HHAT-207ENST00000541565 3164 ntTSL 2 BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 FAM198B-202ENST00000393807 4544 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 GRIA1-213ENST00000521843 3069 ntTSL 2 BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 HYDIN-203ENST00000321489 3685 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 MOCS1-203ENST00000373186 4256 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC5.34□□□□□ -1.56
KRTAP3-3Q9BYR6 CELF2-207ENST00000609692 2210 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 SNX13-202ENST00000409604 4146 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 AKAP9-216ENST00000619023 6006 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PCDHGA8-201ENST00000398604 4605 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP3-3Q9BYR6 PXN-202ENST00000267257 3835 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms