RNA–Protein interactions for RNA: ENST00000261722.7

AP3B2-201, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3B2, Length 3,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-201ENST00000261722 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
AP3B2-201ENST00000261722 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
AP3B2-201ENST00000261722 SHROOM4Q9ULL8 1493 aa18.98■□□□□ 0.63
AP3B2-201ENST00000261722 SUPT5HO00267 1087 aaKnown RBP18.52■□□□□ 0.56
AP3B2-201ENST00000261722 ABCC9O60706 1549 aa18.35■□□□□ 0.53
AP3B2-201ENST00000261722 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
AP3B2-201ENST00000261722 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
AP3B2-201ENST00000261722 HRCP23327 699 aa17.89■□□□□ 0.45
AP3B2-201ENST00000261722 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
AP3B2-201ENST00000261722 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
AP3B2-201ENST00000261722 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.43
AP3B2-201ENST00000261722 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
AP3B2-201ENST00000261722 PCGF6Q9BYE7 350 aa17.52■□□□□ 0.4
AP3B2-201ENST00000261722 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
AP3B2-201ENST00000261722 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
AP3B2-201ENST00000261722 MYT1Q01538 1121 aa17.33■□□□□ 0.36
AP3B2-201ENST00000261722 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
AP3B2-201ENST00000261722 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
AP3B2-201ENST00000261722 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
AP3B2-201ENST00000261722 NACADO15069 1562 aa17.07■□□□□ 0.32
AP3B2-201ENST00000261722 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
AP3B2-201ENST00000261722 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
AP3B2-201ENST00000261722 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
AP3B2-201ENST00000261722 RANGAP1P46060 587 aaPredicted RBP16.92■□□□□ 0.3
AP3B2-201ENST00000261722 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
AP3B2-201ENST00000261722 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
AP3B2-201ENST00000261722 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.29
AP3B2-201ENST00000261722 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
AP3B2-201ENST00000261722 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
AP3B2-201ENST00000261722 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
AP3B2-201ENST00000261722 ACIN1Q9UKV3 1341 aaKnown RBP16.66■□□□□ 0.26
AP3B2-201ENST00000261722 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
AP3B2-201ENST00000261722 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
AP3B2-201ENST00000261722 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
AP3B2-201ENST00000261722 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
AP3B2-201ENST00000261722 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
AP3B2-201ENST00000261722 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
AP3B2-201ENST00000261722 WIZO95785 1651 aa16.46■□□□□ 0.23
AP3B2-201ENST00000261722 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
AP3B2-201ENST00000261722 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
AP3B2-201ENST00000261722 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
AP3B2-201ENST00000261722 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.21
AP3B2-201ENST00000261722 BCL11AQ9H165 835 aa16.33■□□□□ 0.2
AP3B2-201ENST00000261722 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
AP3B2-201ENST00000261722 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
AP3B2-201ENST00000261722 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
AP3B2-201ENST00000261722 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
AP3B2-201ENST00000261722 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
AP3B2-201ENST00000261722 APLP2Q06481 763 aa16.23■□□□□ 0.19
AP3B2-201ENST00000261722 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
AP3B2-201ENST00000261722 FBLN2P98095 1184 aa16.17■□□□□ 0.18
AP3B2-201ENST00000261722 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
AP3B2-201ENST00000261722 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
AP3B2-201ENST00000261722 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
AP3B2-201ENST00000261722 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
AP3B2-201ENST00000261722 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
AP3B2-201ENST00000261722 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.17
AP3B2-201ENST00000261722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
AP3B2-201ENST00000261722 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
AP3B2-201ENST00000261722 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
AP3B2-201ENST00000261722 SOGA1O94964 1423 aa16.02■□□□□ 0.15
AP3B2-201ENST00000261722 ARID3CA6NKF2 412 aa16.02■□□□□ 0.15
AP3B2-201ENST00000261722 PRKCSHP14314 528 aaPredicted RBP15.98■□□□□ 0.15
AP3B2-201ENST00000261722 ANP32EQ9BTT0 268 aa15.97■□□□□ 0.15
AP3B2-201ENST00000261722 ITGAEP38570 1179 aa15.96■□□□□ 0.15
AP3B2-201ENST00000261722 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
AP3B2-201ENST00000261722 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
AP3B2-201ENST00000261722 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
AP3B2-201ENST00000261722 CADPSQ9ULU8 1353 aa15.92■□□□□ 0.14
AP3B2-201ENST00000261722 NESP48681 1621 aa15.9■□□□□ 0.14
AP3B2-201ENST00000261722 RUSC2Q8N2Y8 1516 aa15.88■□□□□ 0.13
AP3B2-201ENST00000261722 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
AP3B2-201ENST00000261722 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
AP3B2-201ENST00000261722 CUX2O14529 1486 aa15.76■□□□□ 0.11
AP3B2-201ENST00000261722 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
AP3B2-201ENST00000261722 MIER1Q8N108 512 aa15.73■□□□□ 0.11
AP3B2-201ENST00000261722 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
AP3B2-201ENST00000261722 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
AP3B2-201ENST00000261722 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
AP3B2-201ENST00000261722 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
AP3B2-201ENST00000261722 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
AP3B2-201ENST00000261722 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
AP3B2-201ENST00000261722 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
AP3B2-201ENST00000261722 CEP162Q5TB80 1403 aa15.64■□□□□ 0.09
AP3B2-201ENST00000261722 CFTRP13569 1480 aa15.64■□□□□ 0.09
AP3B2-201ENST00000261722 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
AP3B2-201ENST00000261722 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
AP3B2-201ENST00000261722 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
AP3B2-201ENST00000261722 CLIP1P30622 1438 aa15.62■□□□□ 0.09
AP3B2-201ENST00000261722 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
AP3B2-201ENST00000261722 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
AP3B2-201ENST00000261722 GOLGA3Q08378 1498 aa15.59■□□□□ 0.09
AP3B2-201ENST00000261722 ERICH6Q7L0X2 663 aa15.58■□□□□ 0.08
AP3B2-201ENST00000261722 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
AP3B2-201ENST00000261722 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
AP3B2-201ENST00000261722 RAPGEF2Q9Y4G8 1499 aa15.56■□□□□ 0.08
AP3B2-201ENST00000261722 EEA1Q15075 1411 aa15.55■□□□□ 0.08
AP3B2-201ENST00000261722 BCANQ96GW7 911 aa15.54■□□□□ 0.08
AP3B2-201ENST00000261722 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.08
AP3B2-201ENST00000261722 CUX1P39880 1505 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms