Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SETP21-201ENST00000514799 892 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RN7SL52P-201ENST00000584271 284 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 FAM27E4-201ENST00000605259 342 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC009974.1-201ENST00000608881 455 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RN7SL722P-201ENST00000617780 284 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RN7SL565P-201ENST00000618246 284 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC004232.3-201ENST00000622977 525 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC034229.5-201ENST00000624258 185 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AP003485.1-201ENST00000625093 753 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MAK-202ENST00000354489 3941 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SAMMSON-213ENST00000641336 1521 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC016251.1-201ENST00000624299 4198 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 TRMT5-201ENST00000261249 5573 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 HNRNPDP2-201ENST00000406475 478 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SSR1P1-201ENST00000407630 814 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 UBE2V1P14-201ENST00000415815 558 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC113412.1-201ENST00000425840 504 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MTND1P32-201ENST00000433043 938 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CYCSP12-201ENST00000437729 300 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 HSFY3P-201ENST00000444242 1191 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ST13P14-201ENST00000474095 734 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC017037.2-201ENST00000513850 890 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AP001636.2-201ENST00000525517 696 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC017100.2-201ENST00000584628 355 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC124856.1-201ENST00000600819 896 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MIR8084-201ENST00000614105 89 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC003001.2-201ENST00000616294 831 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MTHFD1P1-201ENST00000413059 2764 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNA5SP123-201ENST00000363244 119 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 Y_RNA.111-201ENST00000363248 100 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SKP128-201ENST00000364270 303 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNU6-312P-201ENST00000364629 107 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DNAJA1P3-201ENST00000399417 1194 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC068138.1-201ENST00000412635 217 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC007000.2-201ENST00000442564 487 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC073264.2-201ENST00000448886 166 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC002553.3-201ENST00000453002 341 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RPL7P19-201ENST00000469948 618 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC087312.1-201ENST00000471411 480 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NPM1P6-201ENST00000521088 871 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms