RNA–Protein interactions for RNA: ENST00000540161.1

AC073864.1-201, humanhuman

TSL 4 BASIC

Gene AC073864.1, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC073864.1-201ENST00000540161 AEBP2Q6ZN18 517 aaPredicted RBP29.39■■■□□ 2.3
AC073864.1-201ENST00000540161 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
AC073864.1-201ENST00000540161 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
AC073864.1-201ENST00000540161 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
AC073864.1-201ENST00000540161 FOXD1Q16676 465 aa23.23■■□□□ 1.31
AC073864.1-201ENST00000540161 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
AC073864.1-201ENST00000540161 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
AC073864.1-201ENST00000540161 ADRA2BP18089 450 aa22.14■■□□□ 1.13
AC073864.1-201ENST00000540161 PIAS4Q8N2W9 510 aaPredicted RBP21.83■■□□□ 1.09
AC073864.1-201ENST00000540161 MSH5O43196 834 aa21.48■■□□□ 1.03
AC073864.1-201ENST00000540161 POTEDQ86YR6 584 aa20.4■□□□□ 0.86
AC073864.1-201ENST00000540161 PPP4R3CPQ6ZMV5 832 aa20.23■□□□□ 0.83
AC073864.1-201ENST00000540161 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
AC073864.1-201ENST00000540161 MAPK8IP2Q13387 824 aaPredicted RBP20.19■□□□□ 0.82
AC073864.1-201ENST00000540161 DMRT2Q9Y5R5 561 aa19.87■□□□□ 0.77
AC073864.1-201ENST00000540161 CNKSR2Q8WXI2 1034 aa19.7■□□□□ 0.74
AC073864.1-201ENST00000540161 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
AC073864.1-201ENST00000540161 KCNA4P22459 653 aa19.47■□□□□ 0.71
AC073864.1-201ENST00000540161 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
AC073864.1-201ENST00000540161 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
AC073864.1-201ENST00000540161 NPM3O75607 178 aaKnown RBP19.33■□□□□ 0.68
AC073864.1-201ENST00000540161 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
AC073864.1-201ENST00000540161 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
AC073864.1-201ENST00000540161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
AC073864.1-201ENST00000540161 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
AC073864.1-201ENST00000540161 RNF39Q9H2S5 420 aa18.39■□□□□ 0.53
AC073864.1-201ENST00000540161 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
AC073864.1-201ENST00000540161 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
AC073864.1-201ENST00000540161 C1QBPQ07021 282 aaKnown RBP18.15■□□□□ 0.5
AC073864.1-201ENST00000540161 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
AC073864.1-201ENST00000540161 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
AC073864.1-201ENST00000540161 ZBTB22O15209 634 aa17.9■□□□□ 0.46
AC073864.1-201ENST00000540161 MYCNP04198 464 aaPredicted RBP17.84■□□□□ 0.45
AC073864.1-201ENST00000540161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
AC073864.1-201ENST00000540161 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
AC073864.1-201ENST00000540161 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
AC073864.1-201ENST00000540161 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
AC073864.1-201ENST00000540161 CAPN15O75808 1086 aa17.69■□□□□ 0.42
AC073864.1-201ENST00000540161 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
AC073864.1-201ENST00000540161 APLP2Q06481 763 aa17.66■□□□□ 0.42
AC073864.1-201ENST00000540161 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
AC073864.1-201ENST00000540161 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
AC073864.1-201ENST00000540161 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
AC073864.1-201ENST00000540161 ATF5Q9Y2D1 282 aaPredicted RBP17.44■□□□□ 0.38
AC073864.1-201ENST00000540161 DSG3P32926 999 aa17.42■□□□□ 0.38
AC073864.1-201ENST00000540161 ABCB7O75027 752 aa17.35■□□□□ 0.37
AC073864.1-201ENST00000540161 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
AC073864.1-201ENST00000540161 POLA2Q14181 598 aa17.21■□□□□ 0.35
AC073864.1-201ENST00000540161 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
AC073864.1-201ENST00000540161 FBLN2P98095 1184 aa16.69■□□□□ 0.26
AC073864.1-201ENST00000540161 MKRN4PQ13434 485 aaPredicted RBP16.64■□□□□ 0.25
AC073864.1-201ENST00000540161 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
AC073864.1-201ENST00000540161 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
AC073864.1-201ENST00000540161 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
AC073864.1-201ENST00000540161 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
AC073864.1-201ENST00000540161 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
AC073864.1-201ENST00000540161 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
AC073864.1-201ENST00000540161 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
AC073864.1-201ENST00000540161 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
AC073864.1-201ENST00000540161 SSUH2Q9Y2M2 353 aa16.2■□□□□ 0.18
AC073864.1-201ENST00000540161 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
AC073864.1-201ENST00000540161 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
AC073864.1-201ENST00000540161 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
AC073864.1-201ENST00000540161 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
AC073864.1-201ENST00000540161 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
AC073864.1-201ENST00000540161 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
AC073864.1-201ENST00000540161 FKBP8Q14318 412 aa15.93■□□□□ 0.14
AC073864.1-201ENST00000540161 POTEHQ6S545 545 aa15.86■□□□□ 0.13
AC073864.1-201ENST00000540161 PROM2Q8N271 834 aa15.78■□□□□ 0.12
AC073864.1-201ENST00000540161 PIP4P2Q8N4L2 257 aa15.78■□□□□ 0.12
AC073864.1-201ENST00000540161 PRR29P0C7W0 189 aa15.77■□□□□ 0.12
AC073864.1-201ENST00000540161 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
AC073864.1-201ENST00000540161 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
AC073864.1-201ENST00000540161 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
AC073864.1-201ENST00000540161 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
AC073864.1-201ENST00000540161 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
AC073864.1-201ENST00000540161 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
AC073864.1-201ENST00000540161 MIER1Q8N108 512 aa15.39■□□□□ 0.05
AC073864.1-201ENST00000540161 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
AC073864.1-201ENST00000540161 HAX1O00165 279 aa15.38■□□□□ 0.05
AC073864.1-201ENST00000540161 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
AC073864.1-201ENST00000540161 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
AC073864.1-201ENST00000540161 MNX1P50219 401 aaPredicted RBP15.28■□□□□ 0.04
AC073864.1-201ENST00000540161 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
AC073864.1-201ENST00000540161 EVX2Q03828 476 aa15.23■□□□□ 0.03
AC073864.1-201ENST00000540161 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
AC073864.1-201ENST00000540161 VASPP50552 380 aaPredicted RBP15.2■□□□□ 0.02
AC073864.1-201ENST00000540161 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
AC073864.1-201ENST00000540161 ZBTB47Q9UFB7 747 aaPredicted RBP15.11■□□□□ 0.01
AC073864.1-201ENST00000540161 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
AC073864.1-201ENST00000540161 KLHL34Q8N239 644 aa15.07■□□□□ 0
AC073864.1-201ENST00000540161 ZRANB1Q9UGI0 708 aa15.05■□□□□ -0
AC073864.1-201ENST00000540161 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
AC073864.1-201ENST00000540161 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
AC073864.1-201ENST00000540161 TSPYL2Q9H2G4 693 aaPredicted RBP15□□□□□ -0.01
AC073864.1-201ENST00000540161 RASEFQ8IZ41 740 aa14.98□□□□□ -0.01
AC073864.1-201ENST00000540161 NUBP1P53384 320 aa14.97□□□□□ -0.01
AC073864.1-201ENST00000540161 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
AC073864.1-201ENST00000540161 GABBR2O75899 941 aa14.9□□□□□ -0.02
AC073864.1-201ENST00000540161 PHF12Q96QT6 1004 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms