RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.96
SAMMSON-213ENST00000641336 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
SAMMSON-213ENST00000641336 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
SAMMSON-213ENST00000641336 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
SAMMSON-213ENST00000641336 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
SAMMSON-213ENST00000641336 FOXD1Q16676 465 aa17■□□□□ 0.31
SAMMSON-213ENST00000641336 MSH5O43196 834 aa16.25■□□□□ 0.19
SAMMSON-213ENST00000641336 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
SAMMSON-213ENST00000641336 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
SAMMSON-213ENST00000641336 ADRA2BP18089 450 aa15.05■□□□□ -0
SAMMSON-213ENST00000641336 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
SAMMSON-213ENST00000641336 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
SAMMSON-213ENST00000641336 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
SAMMSON-213ENST00000641336 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
SAMMSON-213ENST00000641336 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
SAMMSON-213ENST00000641336 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
SAMMSON-213ENST00000641336 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
SAMMSON-213ENST00000641336 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
SAMMSON-213ENST00000641336 POTEHQ6S545 545 aa13.5□□□□□ -0.25
SAMMSON-213ENST00000641336 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
SAMMSON-213ENST00000641336 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
SAMMSON-213ENST00000641336 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
SAMMSON-213ENST00000641336 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
SAMMSON-213ENST00000641336 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.35
SAMMSON-213ENST00000641336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
SAMMSON-213ENST00000641336 DSG3P32926 999 aa12.6□□□□□ -0.39
SAMMSON-213ENST00000641336 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
SAMMSON-213ENST00000641336 CAPN15O75808 1086 aa12.41□□□□□ -0.42
SAMMSON-213ENST00000641336 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
SAMMSON-213ENST00000641336 SP7Q8TDD2 431 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-213ENST00000641336 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
SAMMSON-213ENST00000641336 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
SAMMSON-213ENST00000641336 ABCB7O75027 752 aa12.05□□□□□ -0.48
SAMMSON-213ENST00000641336 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.48
SAMMSON-213ENST00000641336 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
SAMMSON-213ENST00000641336 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
SAMMSON-213ENST00000641336 NPM3O75607 178 aaKnown RBP11.91□□□□□ -0.5
SAMMSON-213ENST00000641336 APLP2Q06481 763 aa11.84□□□□□ -0.51
SAMMSON-213ENST00000641336 HAX1O00165 279 aa11.68□□□□□ -0.54
SAMMSON-213ENST00000641336 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
SAMMSON-213ENST00000641336 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
SAMMSON-213ENST00000641336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
SAMMSON-213ENST00000641336 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
SAMMSON-213ENST00000641336 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
SAMMSON-213ENST00000641336 EVX2Q03828 476 aa11.51□□□□□ -0.57
SAMMSON-213ENST00000641336 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
SAMMSON-213ENST00000641336 PLSCR2Q9NRY7 297 aa11.48□□□□□ -0.57
SAMMSON-213ENST00000641336 POLA2Q14181 598 aa11.46□□□□□ -0.57
SAMMSON-213ENST00000641336 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
SAMMSON-213ENST00000641336 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
SAMMSON-213ENST00000641336 LHX8Q68G74 356 aa11.45□□□□□ -0.58
SAMMSON-213ENST00000641336 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
SAMMSON-213ENST00000641336 GABBR2O75899 941 aa11.18□□□□□ -0.62
SAMMSON-213ENST00000641336 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
SAMMSON-213ENST00000641336 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
SAMMSON-213ENST00000641336 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
SAMMSON-213ENST00000641336 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
SAMMSON-213ENST00000641336 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
SAMMSON-213ENST00000641336 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
SAMMSON-213ENST00000641336 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
SAMMSON-213ENST00000641336 KCNA4P22459 653 aa10.83□□□□□ -0.68
SAMMSON-213ENST00000641336 POTEMA6NI47 508 aa10.82□□□□□ -0.68
SAMMSON-213ENST00000641336 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
SAMMSON-213ENST00000641336 SPDYE1Q8NFV5 336 aaPredicted RBP10.78□□□□□ -0.68
SAMMSON-213ENST00000641336 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
SAMMSON-213ENST00000641336 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
SAMMSON-213ENST00000641336 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
SAMMSON-213ENST00000641336 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
SAMMSON-213ENST00000641336 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
SAMMSON-213ENST00000641336 PCDH10Q9P2E7 1040 aa10.71□□□□□ -0.69
SAMMSON-213ENST00000641336 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
SAMMSON-213ENST00000641336 CLCN6P51797 869 aa10.68□□□□□ -0.7
SAMMSON-213ENST00000641336 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
SAMMSON-213ENST00000641336 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
SAMMSON-213ENST00000641336 POTEB2H3BUK9 544 aa10.58□□□□□ -0.72
SAMMSON-213ENST00000641336 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
SAMMSON-213ENST00000641336 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
SAMMSON-213ENST00000641336 FBLN2P98095 1184 aa10.47□□□□□ -0.73
SAMMSON-213ENST00000641336 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
SAMMSON-213ENST00000641336 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
SAMMSON-213ENST00000641336 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
SAMMSON-213ENST00000641336 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
SAMMSON-213ENST00000641336 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
SAMMSON-213ENST00000641336 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
SAMMSON-213ENST00000641336 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
SAMMSON-213ENST00000641336 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
SAMMSON-213ENST00000641336 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
SAMMSON-213ENST00000641336 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
SAMMSON-213ENST00000641336 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
SAMMSON-213ENST00000641336 PABPN1Q86U42 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
SAMMSON-213ENST00000641336 PELP1Q8IZL8 1130 aaKnown RBP10.27□□□□□ -0.77
SAMMSON-213ENST00000641336 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
SAMMSON-213ENST00000641336 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
SAMMSON-213ENST00000641336 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
SAMMSON-213ENST00000641336 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
SAMMSON-213ENST00000641336 C7P10643 843 aa10.12□□□□□ -0.79
SAMMSON-213ENST00000641336 SLC39A7Q92504 469 aa10.11□□□□□ -0.79
SAMMSON-213ENST00000641336 PHF12Q96QT6 1004 aa10.11□□□□□ -0.79
SAMMSON-213ENST00000641336 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
SAMMSON-213ENST00000641336 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms