RNA–Protein interactions for RNA: ENST00000539734.1

RERG-IT1-201, RERG intronic transcript 1, humanhuman

TSL 3 BASIC

Gene RERG-IT1, Length 301 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERG-IT1-201ENST00000539734 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
RERG-IT1-201ENST00000539734 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
RERG-IT1-201ENST00000539734 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
RERG-IT1-201ENST00000539734 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
RERG-IT1-201ENST00000539734 FOXD1Q16676 465 aa19.38■□□□□ 0.69
RERG-IT1-201ENST00000539734 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
RERG-IT1-201ENST00000539734 MSH5O43196 834 aa18.41■□□□□ 0.54
RERG-IT1-201ENST00000539734 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
RERG-IT1-201ENST00000539734 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
RERG-IT1-201ENST00000539734 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
RERG-IT1-201ENST00000539734 ADRA2BP18089 450 aa17.7■□□□□ 0.42
RERG-IT1-201ENST00000539734 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
RERG-IT1-201ENST00000539734 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
RERG-IT1-201ENST00000539734 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
RERG-IT1-201ENST00000539734 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.15
RERG-IT1-201ENST00000539734 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
RERG-IT1-201ENST00000539734 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
RERG-IT1-201ENST00000539734 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
RERG-IT1-201ENST00000539734 RNF39Q9H2S5 420 aa15.62■□□□□ 0.09
RERG-IT1-201ENST00000539734 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
RERG-IT1-201ENST00000539734 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
RERG-IT1-201ENST00000539734 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
RERG-IT1-201ENST00000539734 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
RERG-IT1-201ENST00000539734 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
RERG-IT1-201ENST00000539734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.02
RERG-IT1-201ENST00000539734 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
RERG-IT1-201ENST00000539734 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
RERG-IT1-201ENST00000539734 DSG3P32926 999 aa14.47□□□□□ -0.09
RERG-IT1-201ENST00000539734 POTEHQ6S545 545 aa14.46□□□□□ -0.09
RERG-IT1-201ENST00000539734 CAPN15O75808 1086 aa14.44□□□□□ -0.1
RERG-IT1-201ENST00000539734 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
RERG-IT1-201ENST00000539734 APLP2Q06481 763 aa14.26□□□□□ -0.13
RERG-IT1-201ENST00000539734 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
RERG-IT1-201ENST00000539734 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
RERG-IT1-201ENST00000539734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
RERG-IT1-201ENST00000539734 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
RERG-IT1-201ENST00000539734 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
RERG-IT1-201ENST00000539734 KCNA4P22459 653 aa14.04□□□□□ -0.16
RERG-IT1-201ENST00000539734 ABCB7O75027 752 aa14□□□□□ -0.17
RERG-IT1-201ENST00000539734 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
RERG-IT1-201ENST00000539734 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
RERG-IT1-201ENST00000539734 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
RERG-IT1-201ENST00000539734 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
RERG-IT1-201ENST00000539734 POLA2Q14181 598 aa13.66□□□□□ -0.22
RERG-IT1-201ENST00000539734 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
RERG-IT1-201ENST00000539734 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
RERG-IT1-201ENST00000539734 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
RERG-IT1-201ENST00000539734 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
RERG-IT1-201ENST00000539734 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
RERG-IT1-201ENST00000539734 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
RERG-IT1-201ENST00000539734 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
RERG-IT1-201ENST00000539734 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
RERG-IT1-201ENST00000539734 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
RERG-IT1-201ENST00000539734 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
RERG-IT1-201ENST00000539734 HAX1O00165 279 aa13.13□□□□□ -0.31
RERG-IT1-201ENST00000539734 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
RERG-IT1-201ENST00000539734 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
RERG-IT1-201ENST00000539734 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
RERG-IT1-201ENST00000539734 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
RERG-IT1-201ENST00000539734 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
RERG-IT1-201ENST00000539734 FBLN2P98095 1184 aa12.92□□□□□ -0.34
RERG-IT1-201ENST00000539734 ZBTB22O15209 634 aa12.86□□□□□ -0.35
RERG-IT1-201ENST00000539734 EVX2Q03828 476 aa12.85□□□□□ -0.35
RERG-IT1-201ENST00000539734 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
RERG-IT1-201ENST00000539734 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
RERG-IT1-201ENST00000539734 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
RERG-IT1-201ENST00000539734 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
RERG-IT1-201ENST00000539734 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
RERG-IT1-201ENST00000539734 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
RERG-IT1-201ENST00000539734 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
RERG-IT1-201ENST00000539734 GABBR2O75899 941 aa12.62□□□□□ -0.39
RERG-IT1-201ENST00000539734 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
RERG-IT1-201ENST00000539734 LHX8Q68G74 356 aa12.54□□□□□ -0.4
RERG-IT1-201ENST00000539734 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
RERG-IT1-201ENST00000539734 CLCN6P51797 869 aa12.49□□□□□ -0.41
RERG-IT1-201ENST00000539734 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
RERG-IT1-201ENST00000539734 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
RERG-IT1-201ENST00000539734 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
RERG-IT1-201ENST00000539734 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
RERG-IT1-201ENST00000539734 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
RERG-IT1-201ENST00000539734 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
RERG-IT1-201ENST00000539734 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
RERG-IT1-201ENST00000539734 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
RERG-IT1-201ENST00000539734 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
RERG-IT1-201ENST00000539734 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
RERG-IT1-201ENST00000539734 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
RERG-IT1-201ENST00000539734 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
RERG-IT1-201ENST00000539734 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
RERG-IT1-201ENST00000539734 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
RERG-IT1-201ENST00000539734 OTUD5Q96G74 571 aa11.95□□□□□ -0.5
RERG-IT1-201ENST00000539734 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
RERG-IT1-201ENST00000539734 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
RERG-IT1-201ENST00000539734 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
RERG-IT1-201ENST00000539734 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
RERG-IT1-201ENST00000539734 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
RERG-IT1-201ENST00000539734 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
RERG-IT1-201ENST00000539734 POTEMA6NI47 508 aa11.8□□□□□ -0.52
RERG-IT1-201ENST00000539734 C7P10643 843 aa11.8□□□□□ -0.52
RERG-IT1-201ENST00000539734 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
RERG-IT1-201ENST00000539734 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms