Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC012409.4-201ENST00000612923 249 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 EIF3FP1-201ENST00000613970 806 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC008115.3-201ENST00000614874 549 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 AC092999.1-201ENST00000624004 1924 ntBASIC8.27□□□□□ -1.09
VARS2Q5ST30 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.27□□□□□ -1.09
VARS2Q5ST30 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARS2Q5ST30 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC133552.3-201ENST00000572236 1869 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 OR7E25P-202ENST00000641088 5937 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 RNA5SP448-201ENST00000363151 111 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 U3.12-201ENST00000364498 214 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 RNA5SP79-201ENST00000365193 109 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 RNU6-108P-201ENST00000365558 107 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 SNORA10B-201ENST00000384458 133 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 RPL10P10-201ENST00000403509 664 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 RNU6-1140P-201ENST00000410517 106 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 RNU6-77P-201ENST00000410554 91 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 PPIAP17-201ENST00000438507 471 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AL157827.1-201ENST00000447622 132 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 FTH1P7-201ENST00000450676 552 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 SLC25A51P1-201ENST00000468432 871 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 RN7SL58P-201ENST00000473445 294 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 CEACAMP3-202ENST00000483806 638 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 RN7SL776P-201ENST00000493390 268 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AP001922.4-201ENST00000526967 290 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC090607.2-201ENST00000560331 695 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC099489.2-201ENST00000574976 260 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 MRPS5P4-201ENST00000592830 325 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC068020.1-201ENST00000594215 661 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC010620.2-201ENST00000600135 313 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AL136985.2-201ENST00000607372 535 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC015922.4-201ENST00000612568 690 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 PART1_3.1-201ENST00000619680 131 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 AC087893.2-201ENST00000623272 255 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms