RNA–Protein interactions for RNA: ENST00000635564.1

LINC01141-204, Transcript of long intergenic non-protein coding RNA 1141, humanhuman

TSL 5 BASIC

Gene LINC01141, Length 1,008 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01141-204ENST00000635564 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
LINC01141-204ENST00000635564 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
LINC01141-204ENST00000635564 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
LINC01141-204ENST00000635564 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
LINC01141-204ENST00000635564 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
LINC01141-204ENST00000635564 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
LINC01141-204ENST00000635564 FOXD1Q16676 465 aa15.24■□□□□ 0.03
LINC01141-204ENST00000635564 MSH5O43196 834 aa14.91□□□□□ -0.02
LINC01141-204ENST00000635564 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
LINC01141-204ENST00000635564 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
LINC01141-204ENST00000635564 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
LINC01141-204ENST00000635564 ADRA2BP18089 450 aa14.09□□□□□ -0.15
LINC01141-204ENST00000635564 ABCC9O60706 1549 aa14□□□□□ -0.17
LINC01141-204ENST00000635564 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
LINC01141-204ENST00000635564 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
LINC01141-204ENST00000635564 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
LINC01141-204ENST00000635564 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
LINC01141-204ENST00000635564 NACADO15069 1562 aa13.56□□□□□ -0.24
LINC01141-204ENST00000635564 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
LINC01141-204ENST00000635564 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
LINC01141-204ENST00000635564 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
LINC01141-204ENST00000635564 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
LINC01141-204ENST00000635564 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC01141-204ENST00000635564 UNC13AQ9UPW8 1703 aa13.11□□□□□ -0.31
LINC01141-204ENST00000635564 POTEHQ6S545 545 aa13.11□□□□□ -0.31
LINC01141-204ENST00000635564 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
LINC01141-204ENST00000635564 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
LINC01141-204ENST00000635564 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.33
LINC01141-204ENST00000635564 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
LINC01141-204ENST00000635564 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
LINC01141-204ENST00000635564 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
LINC01141-204ENST00000635564 KCNA4P22459 653 aa12.73□□□□□ -0.37
LINC01141-204ENST00000635564 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
LINC01141-204ENST00000635564 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
LINC01141-204ENST00000635564 DNAJC5BQ9UF47 199 aa12.69□□□□□ -0.38
LINC01141-204ENST00000635564 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
LINC01141-204ENST00000635564 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
LINC01141-204ENST00000635564 CC2D2AQ9P2K1 1620 aa12.65□□□□□ -0.38
LINC01141-204ENST00000635564 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
LINC01141-204ENST00000635564 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
LINC01141-204ENST00000635564 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
LINC01141-204ENST00000635564 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
LINC01141-204ENST00000635564 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
LINC01141-204ENST00000635564 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
LINC01141-204ENST00000635564 RNF39Q9H2S5 420 aa12.52□□□□□ -0.41
LINC01141-204ENST00000635564 NCAPD3P42695 1498 aa12.51□□□□□ -0.41
LINC01141-204ENST00000635564 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
LINC01141-204ENST00000635564 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
LINC01141-204ENST00000635564 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
LINC01141-204ENST00000635564 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
LINC01141-204ENST00000635564 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
LINC01141-204ENST00000635564 HMGXB3Q12766 1538 aa12.43□□□□□ -0.42
LINC01141-204ENST00000635564 WIZO95785 1651 aa12.39□□□□□ -0.43
LINC01141-204ENST00000635564 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
LINC01141-204ENST00000635564 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
LINC01141-204ENST00000635564 DCAF8L1A6NGE4 600 aa12.3□□□□□ -0.44
LINC01141-204ENST00000635564 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
LINC01141-204ENST00000635564 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
LINC01141-204ENST00000635564 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
LINC01141-204ENST00000635564 LAMC3Q9Y6N6 1575 aa12.15□□□□□ -0.46
LINC01141-204ENST00000635564 PDS5BQ9NTI5 1447 aa12.12□□□□□ -0.47
LINC01141-204ENST00000635564 NESP48681 1621 aa12.12□□□□□ -0.47
LINC01141-204ENST00000635564 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
LINC01141-204ENST00000635564 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
LINC01141-204ENST00000635564 CFTRP13569 1480 aa12.09□□□□□ -0.47
LINC01141-204ENST00000635564 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.49
LINC01141-204ENST00000635564 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
LINC01141-204ENST00000635564 PRDM2Q13029 1718 aa11.95□□□□□ -0.5
LINC01141-204ENST00000635564 KIF21AQ7Z4S6 1674 aa11.95□□□□□ -0.5
LINC01141-204ENST00000635564 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
LINC01141-204ENST00000635564 CUX2O14529 1486 aa11.9□□□□□ -0.5
LINC01141-204ENST00000635564 ABCC8Q09428 1581 aa11.89□□□□□ -0.51
LINC01141-204ENST00000635564 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
LINC01141-204ENST00000635564 WDR62O43379 1518 aa11.86□□□□□ -0.51
LINC01141-204ENST00000635564 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
LINC01141-204ENST00000635564 URB2Q14146 1524 aaKnown RBP11.84□□□□□ -0.51
LINC01141-204ENST00000635564 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
LINC01141-204ENST00000635564 DNMBPQ6XZF7 1577 aa11.82□□□□□ -0.52
LINC01141-204ENST00000635564 WRNQ14191 1432 aaPredicted RBP eCLIP11.79□□□□□ -0.52
LINC01141-204ENST00000635564 CUX1P39880 1505 aa11.76□□□□□ -0.53
LINC01141-204ENST00000635564 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
LINC01141-204ENST00000635564 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
LINC01141-204ENST00000635564 ZBTB22O15209 634 aa11.74□□□□□ -0.53
LINC01141-204ENST00000635564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01141-204ENST00000635564 SOGA1O94964 1423 aa11.73□□□□□ -0.53
LINC01141-204ENST00000635564 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
LINC01141-204ENST00000635564 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
LINC01141-204ENST00000635564 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
LINC01141-204ENST00000635564 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
LINC01141-204ENST00000635564 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
LINC01141-204ENST00000635564 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
LINC01141-204ENST00000635564 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
LINC01141-204ENST00000635564 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
LINC01141-204ENST00000635564 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
LINC01141-204ENST00000635564 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
LINC01141-204ENST00000635564 ZNF608Q9ULD9 1512 aaPredicted RBP11.63□□□□□ -0.55
LINC01141-204ENST00000635564 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
LINC01141-204ENST00000635564 ABCA10Q8WWZ4 1543 aa11.62□□□□□ -0.55
LINC01141-204ENST00000635564 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
LINC01141-204ENST00000635564 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms