Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 TRIM77BP-201ENST00000524985 1119 ntBASIC4.27□□□□□ -1.73
USF2Q15853 AC005363.1-201ENST00000530779 351 ntBASIC4.27□□□□□ -1.73
USF2Q15853 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.27□□□□□ -1.73
USF2Q15853 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
USF2Q15853 AC084757.1-201ENST00000559987 490 ntBASIC4.27□□□□□ -1.73
USF2Q15853 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USF2Q15853 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.27□□□□□ -1.73
USF2Q15853 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.27□□□□□ -1.73
USF2Q15853 AL138895.2-201ENST00000603019 178 ntBASIC4.27□□□□□ -1.73
USF2Q15853 AC009237.13-201ENST00000603193 276 ntBASIC4.27□□□□□ -1.73
USF2Q15853 TAS2R6P-201ENST00000605022 826 ntBASIC4.27□□□□□ -1.73
USF2Q15853 AL035461.2-201ENST00000619201 524 ntBASIC4.27□□□□□ -1.73
USF2Q15853 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.27□□□□□ -1.73
USF2Q15853 AC079298.2-201ENST00000623885 459 ntBASIC4.27□□□□□ -1.73
USF2Q15853 AC067931.1-201ENST00000624190 671 ntBASIC4.27□□□□□ -1.73
USF2Q15853 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.27□□□□□ -1.73
USF2Q15853 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.27□□□□□ -1.73
USF2Q15853 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
USF2Q15853 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.27□□□□□ -1.73
USF2Q15853 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.27□□□□□ -1.73
USF2Q15853 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.27□□□□□ -1.73
USF2Q15853 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.27□□□□□ -1.73
USF2Q15853 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
USF2Q15853 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USF2Q15853 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.27□□□□□ -1.73
USF2Q15853 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USF2Q15853 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
USF2Q15853 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
USF2Q15853 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 RN7SKP275-201ENST00000364626 301 ntBASIC4.26□□□□□ -1.73
USF2Q15853 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USF2Q15853 RPL10P10-201ENST00000403509 664 ntBASIC4.26□□□□□ -1.73
USF2Q15853 PPIAP9-201ENST00000403866 498 ntBASIC4.26□□□□□ -1.73
USF2Q15853 SNORA11.3-201ENST00000408471 128 ntBASIC4.26□□□□□ -1.73
USF2Q15853 RN7SKP240-201ENST00000410583 375 ntBASIC4.26□□□□□ -1.73
USF2Q15853 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.26□□□□□ -1.73
USF2Q15853 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.26□□□□□ -1.73
USF2Q15853 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.26□□□□□ -1.73
USF2Q15853 AC007161.1-204ENST00000423039 460 ntBASIC4.26□□□□□ -1.73
USF2Q15853 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 NFYAP1-201ENST00000431953 972 ntBASIC4.26□□□□□ -1.73
USF2Q15853 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 AP006222.1-205ENST00000450734 457 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AL358876.1-201ENST00000453364 1075 ntBASIC4.26□□□□□ -1.73
USF2Q15853 RNU6-1218P-201ENST00000458990 108 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC021205.1-201ENST00000468797 348 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC094085.1-201ENST00000468914 584 ntBASIC4.26□□□□□ -1.73
USF2Q15853 UBFD1P1-201ENST00000473259 814 ntBASIC4.26□□□□□ -1.73
USF2Q15853 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.26□□□□□ -1.73
USF2Q15853 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.26□□□□□ -1.73
USF2Q15853 HMGB3P16-201ENST00000508037 287 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC006499.4-201ENST00000510947 694 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC091912.1-201ENST00000511351 248 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.26□□□□□ -1.73
USF2Q15853 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.26□□□□□ -1.73
USF2Q15853 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.26□□□□□ -1.73
USF2Q15853 AC090888.3-201ENST00000558917 509 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.26□□□□□ -1.73
USF2Q15853 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 RN7SL176P-201ENST00000580352 264 ntBASIC4.26□□□□□ -1.73
USF2Q15853 PRPF19P1-201ENST00000584766 898 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC110743.1-201ENST00000584870 478 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.26□□□□□ -1.73
USF2Q15853 ELOCP28-201ENST00000590044 317 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AC012213.4-201ENST00000606457 354 ntBASIC4.26□□□□□ -1.73
USF2Q15853 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.26□□□□□ -1.73
USF2Q15853 SNORA11.6-201ENST00000619030 128 ntBASIC4.26□□□□□ -1.73
USF2Q15853 AL359742.1-201ENST00000622497 540 ntBASIC4.26□□□□□ -1.73
USF2Q15853 MIR1910-201ENST00000636955 80 ntBASIC4.26□□□□□ -1.73
USF2Q15853 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.26□□□□□ -1.73
USF2Q15853 SRRM1P3-201ENST00000426911 2678 ntBASIC4.26□□□□□ -1.73
USF2Q15853 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USF2Q15853 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
USF2Q15853 AC007382.1-201ENST00000624376 2618 ntBASIC4.25□□□□□ -1.73
USF2Q15853 AC100757.1-201ENST00000616872 1835 ntBASIC4.25□□□□□ -1.73
USF2Q15853 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USF2Q15853 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
USF2Q15853 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF2Q15853 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USF2Q15853 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USF2Q15853 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
USF2Q15853 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.25□□□□□ -1.73
USF2Q15853 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.25□□□□□ -1.73
USF2Q15853 MIR375-201ENST00000362103 64 ntBASIC4.25□□□□□ -1.73
USF2Q15853 RNA5SP131-201ENST00000365452 119 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms