RNA–Protein interactions for RNA: ENST00000458990.1

RNU6-1218P-201, Transcript of RNA, U6 small nuclear 1218, pseudogene, humanhuman

BASIC

Gene RNU6-1218P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1218P-201ENST00000458990 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
RNU6-1218P-201ENST00000458990 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
RNU6-1218P-201ENST00000458990 PHF23Q9BUL5 403 aaPredicted RBP11.83□□□□□ -0.52
RNU6-1218P-201ENST00000458990 EHMT2Q96KQ7 1210 aa11.26□□□□□ -0.61
RNU6-1218P-201ENST00000458990 PLPPR3Q6T4P5 718 aa11.22□□□□□ -0.61
RNU6-1218P-201ENST00000458990 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
RNU6-1218P-201ENST00000458990 KCNA4P22459 653 aa10.83□□□□□ -0.68
RNU6-1218P-201ENST00000458990 POTEDQ86YR6 584 aa10.81□□□□□ -0.68
RNU6-1218P-201ENST00000458990 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
RNU6-1218P-201ENST00000458990 SENP3Q9H4L4 574 aaPredicted RBP10.64□□□□□ -0.71
RNU6-1218P-201ENST00000458990 ADRA2BP18089 450 aa10.51□□□□□ -0.73
RNU6-1218P-201ENST00000458990 SLC4A1APQ9BWU0 796 aaKnown RBP10.48□□□□□ -0.73
RNU6-1218P-201ENST00000458990 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
RNU6-1218P-201ENST00000458990 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
RNU6-1218P-201ENST00000458990 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
RNU6-1218P-201ENST00000458990 PPP4R3CPQ6ZMV5 832 aa10.02□□□□□ -0.81
RNU6-1218P-201ENST00000458990 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
RNU6-1218P-201ENST00000458990 ZBTB22O15209 634 aa9.99□□□□□ -0.81
RNU6-1218P-201ENST00000458990 NPM3O75607 178 aaKnown RBP9.88□□□□□ -0.83
RNU6-1218P-201ENST00000458990 FOXD1Q16676 465 aa9.79□□□□□ -0.84
RNU6-1218P-201ENST00000458990 FOXD4L1Q9NU39 408 aa9.69□□□□□ -0.86
RNU6-1218P-201ENST00000458990 FKBP8Q14318 412 aa9.61□□□□□ -0.87
RNU6-1218P-201ENST00000458990 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
RNU6-1218P-201ENST00000458990 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
RNU6-1218P-201ENST00000458990 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
RNU6-1218P-201ENST00000458990 BCANQ96GW7 911 aa9.48□□□□□ -0.89
RNU6-1218P-201ENST00000458990 PIAS4Q8N2W9 510 aaPredicted RBP9.46□□□□□ -0.9
RNU6-1218P-201ENST00000458990 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
RNU6-1218P-201ENST00000458990 HAP1P54257 671 aaPredicted RBP9.39□□□□□ -0.91
RNU6-1218P-201ENST00000458990 DNAJC5BQ9UF47 199 aa9.37□□□□□ -0.91
RNU6-1218P-201ENST00000458990 DAXXQ9UER7 740 aaPredicted RBP9.33□□□□□ -0.92
RNU6-1218P-201ENST00000458990 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
RNU6-1218P-201ENST00000458990 SCAF1Q9H7N4 1312 aaKnown RBP9.29□□□□□ -0.92
RNU6-1218P-201ENST00000458990 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
RNU6-1218P-201ENST00000458990 VSIG10Q8N0Z9 540 aa9.24□□□□□ -0.93
RNU6-1218P-201ENST00000458990 ARXQ96QS3 562 aa9.16□□□□□ -0.94
RNU6-1218P-201ENST00000458990 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
RNU6-1218P-201ENST00000458990 DCAF8L2P0C7V8 631 aa9.13□□□□□ -0.95
RNU6-1218P-201ENST00000458990 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
RNU6-1218P-201ENST00000458990 SLC4A2P04920 1241 aa9.1□□□□□ -0.95
RNU6-1218P-201ENST00000458990 RNF216Q9NWF9 866 aaPredicted RBP9.1□□□□□ -0.95
RNU6-1218P-201ENST00000458990 MYCNP04198 464 aaPredicted RBP9.08□□□□□ -0.96
RNU6-1218P-201ENST00000458990 KDM2AQ9Y2K7 1162 aa9.04□□□□□ -0.96
RNU6-1218P-201ENST00000458990 MAPK8IP2Q13387 824 aaPredicted RBP9□□□□□ -0.97
RNU6-1218P-201ENST00000458990 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
RNU6-1218P-201ENST00000458990 FBLN2P98095 1184 aa8.98□□□□□ -0.97
RNU6-1218P-201ENST00000458990 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
RNU6-1218P-201ENST00000458990 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.98
RNU6-1218P-201ENST00000458990 HOMEZQ8IX15 550 aa8.93□□□□□ -0.98
RNU6-1218P-201ENST00000458990 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.93□□□□□ -0.98
RNU6-1218P-201ENST00000458990 PAXIP1Q6ZW49 1069 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1218P-201ENST00000458990 BBXQ8WY36 941 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1218P-201ENST00000458990 PKD2Q13563 968 aa8.87□□□□□ -0.99
RNU6-1218P-201ENST00000458990 CFAP44Q96MT7 982 aa8.86□□□□□ -0.99
RNU6-1218P-201ENST00000458990 VASPP50552 380 aaPredicted RBP8.85□□□□□ -0.99
RNU6-1218P-201ENST00000458990 HOXD11P31277 338 aaPredicted RBP8.81□□□□□ -1
RNU6-1218P-201ENST00000458990 IFNLR1Q8IU57 520 aaPredicted RBP8.81□□□□□ -1
RNU6-1218P-201ENST00000458990 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
RNU6-1218P-201ENST00000458990 TMEM132AQ24JP5 1023 aa8.79□□□□□ -1
RNU6-1218P-201ENST00000458990 NBR1Q14596 966 aa8.78□□□□□ -1
RNU6-1218P-201ENST00000458990 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
RNU6-1218P-201ENST00000458990 NPM1P06748 294 aaKnown RBP eCLIP8.76□□□□□ -1.01
RNU6-1218P-201ENST00000458990 C14orf37Q86TY3 774 aa8.75□□□□□ -1.01
RNU6-1218P-201ENST00000458990 SPDYE4A6NLX3 237 aa8.72□□□□□ -1.01
RNU6-1218P-201ENST00000458990 SPRYD3Q8NCJ5 442 aa8.72□□□□□ -1.01
RNU6-1218P-201ENST00000458990 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
RNU6-1218P-201ENST00000458990 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
RNU6-1218P-201ENST00000458990 PROM2Q8N271 834 aa8.66□□□□□ -1.02
RNU6-1218P-201ENST00000458990 DMRT2Q9Y5R5 561 aa8.64□□□□□ -1.03
RNU6-1218P-201ENST00000458990 MSH5O43196 834 aa8.63□□□□□ -1.03
RNU6-1218P-201ENST00000458990 DNAJC5Q9H3Z4 198 aa8.61□□□□□ -1.03
RNU6-1218P-201ENST00000458990 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
RNU6-1218P-201ENST00000458990 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
RNU6-1218P-201ENST00000458990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.57□□□□□ -1.04
RNU6-1218P-201ENST00000458990 HNRNPUL2Q1KMD3 747 aaKnown RBP8.57□□□□□ -1.04
RNU6-1218P-201ENST00000458990 SPOCK2Q92563 424 aa8.55□□□□□ -1.04
RNU6-1218P-201ENST00000458990 RGL2O15211 777 aa8.54□□□□□ -1.04
RNU6-1218P-201ENST00000458990 ZNF219Q9P2Y4 722 aaPredicted RBP8.54□□□□□ -1.04
RNU6-1218P-201ENST00000458990 KLHL34Q8N239 644 aa8.52□□□□□ -1.05
RNU6-1218P-201ENST00000458990 SUPT5HO00267 1087 aaKnown RBP8.51□□□□□ -1.05
RNU6-1218P-201ENST00000458990 CHGAP10645 457 aaKnown RBP8.49□□□□□ -1.05
RNU6-1218P-201ENST00000458990 MKRN4PQ13434 485 aaPredicted RBP8.46□□□□□ -1.06
RNU6-1218P-201ENST00000458990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.06
RNU6-1218P-201ENST00000458990 U3KPZ7 1027 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1218P-201ENST00000458990 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
RNU6-1218P-201ENST00000458990 UBTFP17480 764 aaKnown RBP8.34□□□□□ -1.07
RNU6-1218P-201ENST00000458990 TRIM26Q12899 539 aaPredicted RBP8.34□□□□□ -1.07
RNU6-1218P-201ENST00000458990 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
RNU6-1218P-201ENST00000458990 BRPF1P55201 1214 aaPredicted RBP8.31□□□□□ -1.08
RNU6-1218P-201ENST00000458990 CACNB1Q02641 598 aaPredicted RBP8.29□□□□□ -1.08
RNU6-1218P-201ENST00000458990 CIZ1Q9ULV3 898 aaPredicted RBP8.29□□□□□ -1.08
RNU6-1218P-201ENST00000458990 DCAF8L1A6NGE4 600 aa8.28□□□□□ -1.08
RNU6-1218P-201ENST00000458990 PLCD3Q8N3E9 789 aa8.27□□□□□ -1.09
RNU6-1218P-201ENST00000458990 APLP2Q06481 763 aa8.26□□□□□ -1.09
RNU6-1218P-201ENST00000458990 HRCP23327 699 aa8.24□□□□□ -1.09
RNU6-1218P-201ENST00000458990 LMOD2Q6P5Q4 547 aa8.24□□□□□ -1.09
RNU6-1218P-201ENST00000458990 STAG3Q9UJ98 1225 aa8.23□□□□□ -1.09
RNU6-1218P-201ENST00000458990 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
RNU6-1218P-201ENST00000458990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNU6-1218P-201ENST00000458990 NKX1-1Q15270 411 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms