Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC2.12□□□□□ -2.07
USH2AO75445 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 VN2R3P-201ENST00000422626 1412 ntBASIC2.12□□□□□ -2.07
USH2AO75445 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 MTCO1P46-201ENST00000451639 1491 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC2.12□□□□□ -2.07
USH2AO75445 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 AL121950.1-201ENST00000624993 2077 ntBASIC2.12□□□□□ -2.07
USH2AO75445 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USH2AO75445 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USH2AO75445 SNORA73.2-201ENST00000364946 201 ntBASIC2.12□□□□□ -2.07
USH2AO75445 KRR1P1-201ENST00000419430 803 ntBASIC2.12□□□□□ -2.07
USH2AO75445 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AC091286.1-201ENST00000431233 461 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AL451136.1-201ENST00000435399 325 ntBASIC2.12□□□□□ -2.07
USH2AO75445 RPL12P46-201ENST00000436610 195 ntBASIC2.12□□□□□ -2.07
USH2AO75445 RPS29P7-201ENST00000439662 171 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC2.12□□□□□ -2.07
USH2AO75445 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC2.12□□□□□ -2.07
USH2AO75445 SNORA51-201ENST00000606420 132 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC090506.2-201ENST00000624521 419 ntBASIC2.12□□□□□ -2.07
USH2AO75445 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USH2AO75445 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 AC116096.1-201ENST00000566804 2314 ntBASIC2.12□□□□□ -2.07
USH2AO75445 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 OR52E6-202ENST00000379946 954 ntBASIC2.12□□□□□ -2.07
USH2AO75445 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 AC146944.2-203ENST00000502493 354 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC097173.1-201ENST00000505862 819 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC139495.1-202ENST00000513164 354 ntBASIC2.12□□□□□ -2.07
USH2AO75445 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC2.12□□□□□ -2.07
USH2AO75445 AC108738.1-201ENST00000603703 237 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AL049794.2-201ENST00000616301 365 ntBASIC2.12□□□□□ -2.07
USH2AO75445 CASC22-202ENST00000628396 802 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AC005261.4-201ENST00000600047 1385 ntBASIC2.12□□□□□ -2.07
USH2AO75445 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 OR14L1P-202ENST00000641545 3009 ntBASIC2.12□□□□□ -2.07
USH2AO75445 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC2.12□□□□□ -2.07
USH2AO75445 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 AL450023.3-201ENST00000440592 271 ntBASIC2.12□□□□□ -2.07
USH2AO75445 RPL21P89-201ENST00000444021 467 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC130364.2-201ENST00000528639 604 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AC067852.5-201ENST00000589299 310 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AL451086.1-201ENST00000605596 223 ntBASIC2.12□□□□□ -2.07
USH2AO75445 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USH2AO75445 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC2.12□□□□□ -2.07
USH2AO75445 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 AL133268.1-201ENST00000405676 1401 ntBASIC2.12□□□□□ -2.07
USH2AO75445 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC2.12□□□□□ -2.07
USH2AO75445 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 AP000542.3-201ENST00000623391 6114 ntBASIC2.12□□□□□ -2.07
USH2AO75445 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC2.12□□□□□ -2.07
USH2AO75445 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USH2AO75445 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USH2AO75445 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 RN7SKP159-201ENST00000410657 292 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC096664.2-201ENST00000411843 406 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 GOT2P5-201ENST00000433995 546 ntBASIC2.12□□□□□ -2.07
USH2AO75445 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 SSR3-206ENST00000476217 807 ntTSL 3 BASIC2.12□□□□□ -2.07
USH2AO75445 AL049873.1-201ENST00000480540 376 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms