RNA–Protein interactions for RNA: ENST00000415806.2

TNFAIP8-203, Transcript of TNF alpha induced protein 8, humanhuman

TSL 1 (best) BASIC

Gene TNFAIP8, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-203ENST00000415806 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
TNFAIP8-203ENST00000415806 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
TNFAIP8-203ENST00000415806 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
TNFAIP8-203ENST00000415806 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
TNFAIP8-203ENST00000415806 FOXD1Q16676 465 aa15.45■□□□□ 0.06
TNFAIP8-203ENST00000415806 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
TNFAIP8-203ENST00000415806 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
TNFAIP8-203ENST00000415806 ADRA2BP18089 450 aa14.58□□□□□ -0.08
TNFAIP8-203ENST00000415806 PIAS4Q8N2W9 510 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP8-203ENST00000415806 MSH5O43196 834 aa14.28□□□□□ -0.12
TNFAIP8-203ENST00000415806 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
TNFAIP8-203ENST00000415806 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP8-203ENST00000415806 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
TNFAIP8-203ENST00000415806 DMRT2Q9Y5R5 561 aa13.11□□□□□ -0.31
TNFAIP8-203ENST00000415806 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
TNFAIP8-203ENST00000415806 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
TNFAIP8-203ENST00000415806 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
TNFAIP8-203ENST00000415806 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP8-203ENST00000415806 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP8-203ENST00000415806 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
TNFAIP8-203ENST00000415806 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
TNFAIP8-203ENST00000415806 KCNA4P22459 653 aa12.41□□□□□ -0.42
TNFAIP8-203ENST00000415806 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.44
TNFAIP8-203ENST00000415806 RNF39Q9H2S5 420 aa12.27□□□□□ -0.45
TNFAIP8-203ENST00000415806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.47
TNFAIP8-203ENST00000415806 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
TNFAIP8-203ENST00000415806 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
TNFAIP8-203ENST00000415806 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP8-203ENST00000415806 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
TNFAIP8-203ENST00000415806 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP8-203ENST00000415806 CAPN15O75808 1086 aa11.68□□□□□ -0.54
TNFAIP8-203ENST00000415806 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
TNFAIP8-203ENST00000415806 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP8-203ENST00000415806 DSG3P32926 999 aa11.55□□□□□ -0.56
TNFAIP8-203ENST00000415806 ABCB7O75027 752 aa11.49□□□□□ -0.57
TNFAIP8-203ENST00000415806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP8-203ENST00000415806 HNRNPUL2Q1KMD3 747 aaKnown RBP11.47□□□□□ -0.57
TNFAIP8-203ENST00000415806 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.58
TNFAIP8-203ENST00000415806 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP8-203ENST00000415806 ZBTB22O15209 634 aa11.44□□□□□ -0.58
TNFAIP8-203ENST00000415806 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
TNFAIP8-203ENST00000415806 ZNF219Q9P2Y4 722 aaPredicted RBP11.41□□□□□ -0.58
TNFAIP8-203ENST00000415806 APLP2Q06481 763 aa11.39□□□□□ -0.59
TNFAIP8-203ENST00000415806 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP8-203ENST00000415806 POLA2Q14181 598 aa11.26□□□□□ -0.61
TNFAIP8-203ENST00000415806 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
TNFAIP8-203ENST00000415806 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
TNFAIP8-203ENST00000415806 ATXN8OSP0DMR3 200 aa10.98□□□□□ -0.65
TNFAIP8-203ENST00000415806 OSCARQ8IYS5 282 aa10.92□□□□□ -0.66
TNFAIP8-203ENST00000415806 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
TNFAIP8-203ENST00000415806 ZBTB12Q9Y330 459 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP8-203ENST00000415806 POTEHQ6S545 545 aa10.86□□□□□ -0.67
TNFAIP8-203ENST00000415806 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
TNFAIP8-203ENST00000415806 FBLN2P98095 1184 aa10.73□□□□□ -0.69
TNFAIP8-203ENST00000415806 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
TNFAIP8-203ENST00000415806 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
TNFAIP8-203ENST00000415806 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
TNFAIP8-203ENST00000415806 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
TNFAIP8-203ENST00000415806 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
TNFAIP8-203ENST00000415806 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
TNFAIP8-203ENST00000415806 PITPNM1O00562 1244 aa10.6□□□□□ -0.71
TNFAIP8-203ENST00000415806 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP8-203ENST00000415806 PIP4P2Q8N4L2 257 aa10.52□□□□□ -0.73
TNFAIP8-203ENST00000415806 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
TNFAIP8-203ENST00000415806 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
TNFAIP8-203ENST00000415806 PABPN1Q86U42 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
TNFAIP8-203ENST00000415806 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.74
TNFAIP8-203ENST00000415806 SPDYE1Q8NFV5 336 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP8-203ENST00000415806 PRKAR2AP13861 404 aaKnown RBP10.32□□□□□ -0.76
TNFAIP8-203ENST00000415806 HAX1O00165 279 aa10.32□□□□□ -0.76
TNFAIP8-203ENST00000415806 CHADLQ6NUI6 762 aa10.32□□□□□ -0.76
TNFAIP8-203ENST00000415806 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
TNFAIP8-203ENST00000415806 PRR29P0C7W0 189 aa10.28□□□□□ -0.76
TNFAIP8-203ENST00000415806 EVX2Q03828 476 aa10.26□□□□□ -0.77
TNFAIP8-203ENST00000415806 SP7Q8TDD2 431 aaPredicted RBP10.21□□□□□ -0.77
TNFAIP8-203ENST00000415806 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP8-203ENST00000415806 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
TNFAIP8-203ENST00000415806 CREBZFQ9NS37 354 aa10.06□□□□□ -0.8
TNFAIP8-203ENST00000415806 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
TNFAIP8-203ENST00000415806 CD44P16070 742 aaKnown RBP10□□□□□ -0.81
TNFAIP8-203ENST00000415806 PROM2Q8N271 834 aa9.99□□□□□ -0.81
TNFAIP8-203ENST00000415806 FKBP8Q14318 412 aa9.97□□□□□ -0.81
TNFAIP8-203ENST00000415806 GABBR2O75899 941 aa9.95□□□□□ -0.82
TNFAIP8-203ENST00000415806 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
TNFAIP8-203ENST00000415806 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
TNFAIP8-203ENST00000415806 MIER1Q8N108 512 aa9.83□□□□□ -0.84
TNFAIP8-203ENST00000415806 PHF12Q96QT6 1004 aa9.81□□□□□ -0.84
TNFAIP8-203ENST00000415806 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
TNFAIP8-203ENST00000415806 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
TNFAIP8-203ENST00000415806 POTEIP0CG38 1075 aa9.77□□□□□ -0.84
TNFAIP8-203ENST00000415806 PLCD3Q8N3E9 789 aa9.77□□□□□ -0.85
TNFAIP8-203ENST00000415806 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP8-203ENST00000415806 GALR2O43603 387 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP8-203ENST00000415806 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP8-203ENST00000415806 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
TNFAIP8-203ENST00000415806 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
TNFAIP8-203ENST00000415806 DCBLD2Q96PD2 775 aa9.7□□□□□ -0.86
TNFAIP8-203ENST00000415806 MS4A3Q96HJ5 214 aa9.64□□□□□ -0.87
TNFAIP8-203ENST00000415806 CCDC61Q9Y6R9 512 aa9.64□□□□□ -0.87
TNFAIP8-203ENST00000415806 CLCN6P51797 869 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms