Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 AL445228.2-201ENST00000605589 952 ntBASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 AC130371.2-201ENST00000619443 611 ntBASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 AC073508.3-201ENST00000619697 1419 ntBASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 AC097488.1-201ENST00000507834 756 ntBASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G3Q9Y6M4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 KRT18P35-201ENST00000510488 1269 ntBASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 AP000692.2-201ENST00000608391 879 ntBASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G3Q9Y6M4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 AC128688.1-201ENST00000487626 519 ntBASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 HLA-A-209ENST00000638375 975 ntBASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G3Q9Y6M4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms