Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC3AQ9Y2H6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
FNDC3AQ9Y2H6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 BX119927.1-201ENST00000636596 1552 ntBASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
FNDC3AQ9Y2H6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 AL691432.2-201ENST00000607222 2038 ntBASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC3AQ9Y2H6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 AC124283.5-201ENST00000624661 1809 ntBASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 AC023632.3-201ENST00000521633 145 ntBASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 AC097493.4-201ENST00000641197 219 ntBASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.93■□□□□ 0.78
FNDC3AQ9Y2H6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms