Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 MTDHP1-201ENST00000605323 784 ntBASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP4E1Q9UPM8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 AC006058.3-201ENST00000606217 1069 ntBASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP4E1Q9UPM8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
AP4E1Q9UPM8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
AP4E1Q9UPM8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
AP4E1Q9UPM8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
AP4E1Q9UPM8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
AP4E1Q9UPM8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
AP4E1Q9UPM8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
AP4E1Q9UPM8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 POU5F1P3-201ENST00000428824 1078 ntBASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 KRT18P16-201ENST00000510337 1294 ntBASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 AC073648.6-201ENST00000641589 218 ntBASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP4E1Q9UPM8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 AC007952.6-201ENST00000573168 2673 ntBASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 AC003957.1-201ENST00000625108 2673 ntBASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4E1Q9UPM8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms