Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 KRT8P20-201ENST00000423953 1409 ntBASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 PTBP1P-201ENST00000554374 1601 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 FAM197Y1-201ENST00000421178 764 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 FAM210CP-201ENST00000445714 574 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 KRT18P21-201ENST00000515767 1272 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 AP003071.4-201ENST00000562276 1284 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 CD177P1-201ENST00000606252 935 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 AL031963.3-201ENST00000606441 850 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 PCDHAC2-203ENST00000615316 3011 ntBASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.03■□□□□ 0.48
NPIPA1Q9UND3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.02■□□□□ 0.48
NPIPA1Q9UND3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPIPA1Q9UND3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.02■□□□□ 0.47
NPIPA1Q9UND3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPIPA1Q9UND3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
NPIPA1Q9UND3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.02■□□□□ 0.47
NPIPA1Q9UND3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NPIPA1Q9UND3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPIPA1Q9UND3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 AC112907.3-201ENST00000577781 2400 ntBASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA1Q9UND3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA1Q9UND3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA1Q9UND3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms