Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.56■■□□□ 1.2
SYNPO2Q9UMS6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SYNPO2Q9UMS6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.56■■□□□ 1.2
SYNPO2Q9UMS6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SYNPO2Q9UMS6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.56■■□□□ 1.2
SYNPO2Q9UMS6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 AC092667.1-201ENST00000434301 2586 ntBASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 SLC25A3P1-201ENST00000443844 931 ntBASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 CA15P1-201ENST00000481698 905 ntBASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 AC128688.1-201ENST00000487626 519 ntBASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 KRT18P21-201ENST00000515767 1272 ntBASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 AC073508.3-201ENST00000619697 1419 ntBASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.55■■□□□ 1.2
SYNPO2Q9UMS6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SYNPO2Q9UMS6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYNPO2Q9UMS6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 TERF1P1-201ENST00000311003 1181 ntBASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYNPO2Q9UMS6 CLDN5-201ENST00000403084 2357 ntBASIC22.52■■□□□ 1.19
SYNPO2Q9UMS6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 LINC01006-201ENST00000333319 2292 ntBASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 TMPOP1-202ENST00000424642 1267 ntBASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
SYNPO2Q9UMS6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms