Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NIPSNAP3AQ9UFN0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
NIPSNAP3AQ9UFN0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NIPSNAP3AQ9UFN0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
NIPSNAP3AQ9UFN0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
NIPSNAP3AQ9UFN0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NIPSNAP3AQ9UFN0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 AC034268.1-201ENST00000441047 882 ntBASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NIPSNAP3AQ9UFN0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NIPSNAP3AQ9UFN0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 CYP2T3P-201ENST00000601990 817 ntBASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NIPSNAP3AQ9UFN0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPSNAP3AQ9UFN0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NIPSNAP3AQ9UFN0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.61■□□□□ 0.57
NIPSNAP3AQ9UFN0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NIPSNAP3AQ9UFN0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NIPSNAP3AQ9UFN0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms