Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
HACD3Q9P035 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.76■□□□□ 0.75
HACD3Q9P035 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.76■□□□□ 0.75
HACD3Q9P035 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HACD3Q9P035 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.75■□□□□ 0.75
HACD3Q9P035 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HACD3Q9P035 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.75■□□□□ 0.75
HACD3Q9P035 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.75■□□□□ 0.75
HACD3Q9P035 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.75■□□□□ 0.75
HACD3Q9P035 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.75■□□□□ 0.75
HACD3Q9P035 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
HACD3Q9P035 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.75■□□□□ 0.75
HACD3Q9P035 PRKY-204ENST00000533551 1019 ntBASIC19.75■□□□□ 0.75
HACD3Q9P035 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HACD3Q9P035 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HACD3Q9P035 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HACD3Q9P035 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HACD3Q9P035 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
HACD3Q9P035 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.75■□□□□ 0.75
HACD3Q9P035 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HACD3Q9P035 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HACD3Q9P035 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HACD3Q9P035 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.74■□□□□ 0.75
HACD3Q9P035 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.74■□□□□ 0.75
HACD3Q9P035 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.74■□□□□ 0.75
HACD3Q9P035 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 AC069544.1-201ENST00000609399 999 ntBASIC19.74■□□□□ 0.75
HACD3Q9P035 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 AP006587.1-201ENST00000534129 1502 ntBASIC19.74■□□□□ 0.75
HACD3Q9P035 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HACD3Q9P035 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HACD3Q9P035 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HACD3Q9P035 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.73■□□□□ 0.75
HACD3Q9P035 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HACD3Q9P035 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.73■□□□□ 0.75
HACD3Q9P035 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 YBX1P10-201ENST00000444752 975 ntBASIC19.73■□□□□ 0.75
HACD3Q9P035 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.73■□□□□ 0.75
HACD3Q9P035 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HACD3Q9P035 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.73■□□□□ 0.75
HACD3Q9P035 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.73■□□□□ 0.75
HACD3Q9P035 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.73■□□□□ 0.75
HACD3Q9P035 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.73■□□□□ 0.75
HACD3Q9P035 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HACD3Q9P035 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HACD3Q9P035 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HACD3Q9P035 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HACD3Q9P035 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.72■□□□□ 0.75
HACD3Q9P035 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HACD3Q9P035 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms