Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 AC113410.3-201ENST00000623366 203 ntBASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 SNORA78-201ENST00000459373 127 ntBASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPHK1Q9NYA1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 AP002982.1-201ENST00000492365 877 ntBASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 AC125437.2-201ENST00000625180 2167 ntBASIC18.85■□□□□ 0.61
SPHK1Q9NYA1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 AL353807.1-201ENST00000427475 662 ntBASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 TSPY7P-201ENST00000431358 1114 ntBASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SPHK1Q9NYA1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPHK1Q9NYA1 KRT8P8-201ENST00000434750 1448 ntBASIC18.83■□□□□ 0.61
SPHK1Q9NYA1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPHK1Q9NYA1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.83■□□□□ 0.61
SPHK1Q9NYA1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPHK1Q9NYA1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPHK1Q9NYA1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPHK1Q9NYA1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 NIFKP9-201ENST00000419265 221 ntBASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 FAM197Y1-201ENST00000421178 764 ntBASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 AC073195.1-201ENST00000607241 877 ntBASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 AL353708.3-201ENST00000610272 989 ntBASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms