Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPF1Q9NWY4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 YBX1P10-201ENST00000444752 975 ntBASIC18.1■□□□□ 0.49
HPF1Q9NWY4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 AP002982.1-201ENST00000492365 877 ntBASIC18.1■□□□□ 0.49
HPF1Q9NWY4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 AF186192.3-201ENST00000583427 947 ntBASIC18.1■□□□□ 0.49
HPF1Q9NWY4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 AC113410.3-201ENST00000623366 203 ntBASIC18.1■□□□□ 0.49
HPF1Q9NWY4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HPF1Q9NWY4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.09■□□□□ 0.49
HPF1Q9NWY4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 KRT17P2-201ENST00000300992 1314 ntBASIC18.09■□□□□ 0.49
HPF1Q9NWY4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPF1Q9NWY4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HPF1Q9NWY4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 TSPY7P-201ENST00000431358 1114 ntBASIC18.08■□□□□ 0.48
HPF1Q9NWY4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 MIR4785-201ENST00000585005 73 ntBASIC18.08■□□□□ 0.48
HPF1Q9NWY4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.08■□□□□ 0.48
HPF1Q9NWY4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms