Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.41■□□□□ 0.54
LYRM4Q9HD34 SLC25A24-204ENST00000569674 2357 ntBASIC18.41■□□□□ 0.54
LYRM4Q9HD34 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYRM4Q9HD34 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYRM4Q9HD34 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.41■□□□□ 0.54
LYRM4Q9HD34 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.4■□□□□ 0.54
LYRM4Q9HD34 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM4Q9HD34 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 AL158211.5-201ENST00000623583 2518 ntBASIC18.39■□□□□ 0.53
LYRM4Q9HD34 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM4Q9HD34 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 UBE2SP1-201ENST00000450587 669 ntBASIC18.38■□□□□ 0.53
LYRM4Q9HD34 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.38■□□□□ 0.53
LYRM4Q9HD34 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.37■□□□□ 0.53
LYRM4Q9HD34 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYRM4Q9HD34 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms