Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.77■□□□□ 0.75
ATP13A3Q9H7F0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 AC012618.2-201ENST00000428058 849 ntBASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 C1QL1P1-201ENST00000568105 661 ntBASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ATP13A3Q9H7F0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AIRN-201ENST00000601203 4374 ntBASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 RPS2P55-201ENST00000397318 883 ntBASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 RPS2P4-201ENST00000476944 856 ntBASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AC107956.1-201ENST00000494359 873 ntBASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AP001412.1-201ENST00000608405 714 ntBASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP13A3Q9H7F0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 AP002982.1-201ENST00000492365 877 ntBASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 AC233702.5-201ENST00000584107 538 ntBASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 Z99916.2-201ENST00000604037 246 ntBASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A3Q9H7F0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms