Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 CYP2T3P-201ENST00000601990 817 ntBASIC20.34■□□□□ 0.85
DDX47Q9H0S4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 KRT18P11-201ENST00000435214 1283 ntBASIC20.33■□□□□ 0.85
DDX47Q9H0S4 AC023632.3-201ENST00000521633 145 ntBASIC20.33■□□□□ 0.85
DDX47Q9H0S4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
DDX47Q9H0S4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 AC006333.2-201ENST00000607957 2099 ntBASIC20.33■□□□□ 0.84
DDX47Q9H0S4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX47Q9H0S4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.32■□□□□ 0.84
DDX47Q9H0S4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 TEX21P-204ENST00000641479 1693 ntBASIC20.32■□□□□ 0.84
DDX47Q9H0S4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX47Q9H0S4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX47Q9H0S4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms