Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.98□□□□□ -1.292e-10■■■■□ 19.5
CSTF2TQ9H0L4 CDK1-207ENST00000519078 723 ntTSL 36.53□□□□□ -1.362e-10■■■■□ 19.5
CSTF2TQ9H0L4 CDK1-206ENST00000487784 598 ntTSL 56.16□□□□□ -1.422e-10■■■■□ 19.5
CSTF2TQ9H0L4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.92□□□□□ -1.622e-10■■■■□ 19.5
CSTF2TQ9H0L4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.39□□□□□ -1.712e-10■■■■□ 19.5
CSTF2TQ9H0L4 FGFRL1-206ENST00000512174 571 ntTSL 319.17■□□□□ 0.664e-7■■■■□ 19.5
CSTF2TQ9H0L4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.57■□□□□ 0.245e-7■■■■□ 19.5
CSTF2TQ9H0L4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.155e-7■■■■□ 19.5
CSTF2TQ9H0L4 LZTS2-207ENST00000489526 802 ntTSL 218.32■□□□□ 0.523e-8■■■■□ 19.5
CSTF2TQ9H0L4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.343e-8■■■■□ 19.5
CSTF2TQ9H0L4 LZTS2-204ENST00000429732 701 ntTSL 516.62■□□□□ 0.258e-9■■■■□ 19.5
CSTF2TQ9H0L4 LZTS2-203ENST00000426584 816 ntTSL 315.43■□□□□ 0.063e-8■■■■□ 19.5
CSTF2TQ9H0L4 LZTS2-206ENST00000481129 745 ntTSL 313.31□□□□□ -0.289e-9■■■■□ 19.5
CSTF2TQ9H0L4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.31e-6■■■■□ 19.5
CSTF2TQ9H0L4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.06■□□□□ 0.481e-6■■■■□ 19.5
CSTF2TQ9H0L4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.061e-6■■■■□ 19.5
CSTF2TQ9H0L4 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.351e-6■■■■□ 19.5
CSTF2TQ9H0L4 ADAP1-202ENST00000435943 559 ntTSL 512.13□□□□□ -0.471e-6■■■■□ 19.5
CSTF2TQ9H0L4 ADAP1-210ENST00000477906 579 ntTSL 311.82□□□□□ -0.521e-6■■■■□ 19.5
CSTF2TQ9H0L4 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.483e-7■■■■□ 19.5
CSTF2TQ9H0L4 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.523e-7■■■■□ 19.5
CSTF2TQ9H0L4 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.753e-7■■■■□ 19.5
CSTF2TQ9H0L4 EEF1D-237ENST00000531281 813 ntTSL 216.09■□□□□ 0.172e-11■■■■□ 19.5
CSTF2TQ9H0L4 EEF1D-239ENST00000531670 926 ntTSL 314.67□□□□□ -0.062e-11■■■■□ 19.5
CSTF2TQ9H0L4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.36■□□□□ 0.213e-15■■■■□ 19.5
CSTF2TQ9H0L4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.033e-15■■■■□ 19.5
CSTF2TQ9H0L4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.063e-8■■■■□ 19.5
CSTF2TQ9H0L4 EZR-204ENST00000476189 956 ntTSL 311.23□□□□□ -0.613e-8■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-216ENST00000542782 682 ntTSL 220.62■□□□□ 0.892e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-210ENST00000537557 578 ntTSL 319.53■□□□□ 0.722e-6■■■■□ 19.5
CSTF2TQ9H0L4 THOC7-207ENST00000498422 738 ntTSL 317.51■□□□□ 0.391e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-206ENST00000535344 561 ntTSL 417.12■□□□□ 0.332e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.79■□□□□ 0.282e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-207ENST00000535383 665 ntTSL 216.56■□□□□ 0.242e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.242e-6■■■■□ 19.5
CSTF2TQ9H0L4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.041e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-211ENST00000539234 440 ntTSL 513.57□□□□□ -0.242e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-219ENST00000544749 452 ntTSL 313.57□□□□□ -0.242e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.372e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-208ENST00000535587 548 ntTSL 512.71□□□□□ -0.372e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.15□□□□□ -0.462e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-204ENST00000535266 533 ntTSL 512.11□□□□□ -0.472e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-220ENST00000546234 854 ntTSL 211.91□□□□□ -0.52e-6■■■■□ 19.5
CSTF2TQ9H0L4 THOC7-204ENST00000469584 836 ntTSL 2 BASIC10.6□□□□□ -0.711e-6■■■■□ 19.5
CSTF2TQ9H0L4 THOC7-202ENST00000464327 459 ntTSL 57.63□□□□□ -1.191e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-209ENST00000536594 543 ntTSL 57.07□□□□□ -1.282e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.312e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.422e-6■■■■□ 19.5
CSTF2TQ9H0L4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.452e-6■■■■□ 19.5
CSTF2TQ9H0L4 GRAMD4-205ENST00000447351 375 ntTSL 312.81□□□□□ -0.362e-6■■■■□ 19.5
CSTF2TQ9H0L4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.2■□□□□ 0.985e-7■■■■□ 19.5
CSTF2TQ9H0L4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.22■□□□□ 0.195e-7■■■■□ 19.5
CSTF2TQ9H0L4 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.355e-7■■■■□ 19.5
CSTF2TQ9H0L4 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.03□□□□□ -0.485e-7■■■■□ 19.5
CSTF2TQ9H0L4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.25e-10■■■■□ 19.5
CSTF2TQ9H0L4 TGFBR1-207ENST00000549766 1678 ntTSL 521.82■■□□□ 1.081e-7■■■■□ 19.5
CSTF2TQ9H0L4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.821e-7■■■■□ 19.5
CSTF2TQ9H0L4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.32■□□□□ 0.521e-7■■■■□ 19.5
CSTF2TQ9H0L4 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC10□□□□□ -0.811e-7■■■■□ 19.5
CSTF2TQ9H0L4 TGFBR1-204ENST00000547314 533 ntTSL 47.01□□□□□ -1.291e-7■■■■□ 19.5
CSTF2TQ9H0L4 TGFBR1-210ENST00000552573 526 ntTSL 43.51□□□□□ -1.851e-7■■■■□ 19.5
CSTF2TQ9H0L4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.81■□□□□ 0.282e-6■■■■□ 19.5
CSTF2TQ9H0L4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.172e-6■■■■□ 19.5
CSTF2TQ9H0L4 BTG3-204ENST00000464058 531 ntTSL 215.83■□□□□ 0.122e-6■■■■□ 19.5
CSTF2TQ9H0L4 BTG3-203ENST00000457956 511 ntTSL 314.97□□□□□ -0.012e-6■■■■□ 19.5
CSTF2TQ9H0L4 ZNF444-203ENST00000587195 571 ntTSL 420.76■□□□□ 0.911e-7■■■■□ 19.5
CSTF2TQ9H0L4 ZNF444-206ENST00000587664 568 ntTSL 318.75■□□□□ 0.591e-7■■■■□ 19.5
CSTF2TQ9H0L4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.935e-7■■■■□ 19.5
CSTF2TQ9H0L4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.75e-7■■■■□ 19.5
CSTF2TQ9H0L4 HDGFL2-205ENST00000601353 648 ntTSL 511.43□□□□□ -0.585e-7■■■■□ 19.5
CSTF2TQ9H0L4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.049e-7■■■■□ 19.5
CSTF2TQ9H0L4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.96■■□□□ 1.113e-6■■■■□ 19.4
CSTF2TQ9H0L4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.043e-6■■■■□ 19.4
CSTF2TQ9H0L4 MCF2L-223ENST00000473345 399 ntTSL 39.12□□□□□ -0.951e-6■■■■□ 19.4
CSTF2TQ9H0L4 DVL2-214ENST00000576949 995 ntTSL 422.39■■□□□ 1.172e-7■■■■□ 19.4
CSTF2TQ9H0L4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.66e-8■■■■□ 19.4
CSTF2TQ9H0L4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.252e-7■■■■□ 19.4
CSTF2TQ9H0L4 LRRC14-203ENST00000527730 978 ntTSL 215.31■□□□□ 0.046e-8■■■■□ 19.4
CSTF2TQ9H0L4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.016e-8■■■■□ 19.4
CSTF2TQ9H0L4 KDM4B-208ENST00000589104 3470 ntTSL 212.69□□□□□ -0.387e-7■■■■□ 19.4
CSTF2TQ9H0L4 XPO1-206ENST00000428210 6776 ntTSL 212.76□□□□□ -0.372e-12■■■■□ 19.4
CSTF2TQ9H0L4 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.712e-6■■■■□ 19.4
CSTF2TQ9H0L4 GNPTG-205ENST00000527168 1317 ntTSL 521.7■■□□□ 1.062e-7■■■■□ 19.4
CSTF2TQ9H0L4 GNPTG-208ENST00000529957 922 ntTSL 520.84■□□□□ 0.932e-7■■■■□ 19.4
CSTF2TQ9H0L4 GNPTG-207ENST00000529110 552 ntTSL 220.57■□□□□ 0.882e-7■■■■□ 19.4
CSTF2TQ9H0L4 GNPTG-206ENST00000527876 550 ntTSL 420.56■□□□□ 0.882e-7■■■■□ 19.4
CSTF2TQ9H0L4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.872e-7■■■■□ 19.4
CSTF2TQ9H0L4 GNPTG-202ENST00000526820 572 ntTSL 318.14■□□□□ 0.492e-7■■■■□ 19.4
CSTF2TQ9H0L4 GET4-207ENST00000483469 370 ntTSL 217.25■□□□□ 0.356e-7■■■■□ 19.4
CSTF2TQ9H0L4 GET4-204ENST00000426056 502 ntTSL 49.55□□□□□ -0.886e-7■■■■□ 19.4
CSTF2TQ9H0L4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.361e-6■■■■□ 19.4
CSTF2TQ9H0L4 ERF-203ENST00000593944 555 ntTSL 417.63■□□□□ 0.412e-10■■■■□ 19.4
CSTF2TQ9H0L4 ERF-205ENST00000595941 227 ntTSL 47.33□□□□□ -1.242e-10■■■■□ 19.4
CSTF2TQ9H0L4 ESRRA-206ENST00000539594 747 ntTSL 326.21■■□□□ 1.796e-8■■■■□ 19.4
CSTF2TQ9H0L4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.516e-8■■■■□ 19.4
CSTF2TQ9H0L4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.246e-8■■■■□ 19.4
CSTF2TQ9H0L4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.63□□□□□ -0.074e-7■■■■□ 19.4
CSTF2TQ9H0L4 C2orf48-202ENST00000619640 480 ntTSL 1 (best)14.13□□□□□ -0.154e-7■■■■□ 19.4
CSTF2TQ9H0L4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.18□□□□□ -0.34e-7■■■■□ 19.4
CSTF2TQ9H0L4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.38■□□□□ 0.379e-7■■■■□ 19.4
Retrieved 100 of 19,151 protein–RNA pairs in 169.8 ms