Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 KRT18P68-201ENST00000392293 1000 ntBASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 HTR7P1-202ENST00000624664 4411 ntBASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COMMD4Q9H0A8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 NTF6G-201ENST00000591094 616 ntBASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COMMD4Q9H0A8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COMMD4Q9H0A8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.22■□□□□ 0.35
COMMD4Q9H0A8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms