Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL355802.2-201ENST00000402069 882 ntBASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 AC098934.4-201ENST00000564127 592 ntBASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 AC083880.1-201ENST00000608266 535 ntBASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM54Q9BYV2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 HLA-L-209ENST00000420110 1011 ntBASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM54Q9BYV2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM54Q9BYV2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM54Q9BYV2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TRIM54Q9BYV2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
TRIM54Q9BYV2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM54Q9BYV2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM54Q9BYV2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM54Q9BYV2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 ID1-201ENST00000376105 1233 ntBASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 RPS2P52-201ENST00000469610 820 ntBASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM54Q9BYV2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM54Q9BYV2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM54Q9BYV2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms