Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDCA3Q99618 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
CDCA3Q99618 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDCA3Q99618 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDCA3Q99618 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDCA3Q99618 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
CDCA3Q99618 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.41■□□□□ 0.86
CDCA3Q99618 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.41■□□□□ 0.86
CDCA3Q99618 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.41■□□□□ 0.86
CDCA3Q99618 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.41■□□□□ 0.86
CDCA3Q99618 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.41■□□□□ 0.86
CDCA3Q99618 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.41■□□□□ 0.86
CDCA3Q99618 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.41■□□□□ 0.86
CDCA3Q99618 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA3Q99618 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
CDCA3Q99618 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 KRT8P45-201ENST00000414328 1447 ntBASIC20.4■□□□□ 0.86
CDCA3Q99618 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.4■□□□□ 0.86
CDCA3Q99618 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 ZNF444P1-201ENST00000559497 298 ntBASIC20.4■□□□□ 0.86
CDCA3Q99618 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
CDCA3Q99618 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA3Q99618 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.4■□□□□ 0.86
CDCA3Q99618 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDCA3Q99618 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA3Q99618 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA3Q99618 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA3Q99618 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA3Q99618 AP001271.2-201ENST00000624018 1556 ntBASIC20.39■□□□□ 0.85
CDCA3Q99618 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDCA3Q99618 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.39■□□□□ 0.85
CDCA3Q99618 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA3Q99618 STARP1-201ENST00000397973 869 ntBASIC20.39■□□□□ 0.85
CDCA3Q99618 AC112907.2-201ENST00000448639 330 ntBASIC20.39■□□□□ 0.85
CDCA3Q99618 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.39■□□□□ 0.85
CDCA3Q99618 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.39■□□□□ 0.85
CDCA3Q99618 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA3Q99618 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.39■□□□□ 0.85
CDCA3Q99618 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA3Q99618 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.39■□□□□ 0.85
CDCA3Q99618 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDCA3Q99618 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA3Q99618 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA3Q99618 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDCA3Q99618 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA3Q99618 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.38■□□□□ 0.85
CDCA3Q99618 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA3Q99618 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDCA3Q99618 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.38■□□□□ 0.85
CDCA3Q99618 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.38■□□□□ 0.85
CDCA3Q99618 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA3Q99618 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA3Q99618 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA3Q99618 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.38■□□□□ 0.85
CDCA3Q99618 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.38■□□□□ 0.85
CDCA3Q99618 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDCA3Q99618 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDCA3Q99618 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CDCA3Q99618 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.38■□□□□ 0.85
CDCA3Q99618 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.38■□□□□ 0.85
CDCA3Q99618 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDCA3Q99618 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDCA3Q99618 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.37■□□□□ 0.85
CDCA3Q99618 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.37■□□□□ 0.85
CDCA3Q99618 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDCA3Q99618 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.37■□□□□ 0.85
CDCA3Q99618 ATP5G2P1-201ENST00000433580 426 ntBASIC20.37■□□□□ 0.85
CDCA3Q99618 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms