Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
BBS4Q96RK4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BBS4Q96RK4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.51■□□□□ 0.55
BBS4Q96RK4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 AC116562.4-201ENST00000641316 2276 ntBASIC18.5■□□□□ 0.55
BBS4Q96RK4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 AC120498.8-201ENST00000614275 531 ntBASIC18.5■□□□□ 0.55
BBS4Q96RK4 AL121906.2-201ENST00000621597 723 ntBASIC18.5■□□□□ 0.55
BBS4Q96RK4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
BBS4Q96RK4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BBS4Q96RK4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BBS4Q96RK4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.49■□□□□ 0.55
BBS4Q96RK4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
BBS4Q96RK4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BBS4Q96RK4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms