Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NR1H4Q96RI1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 MIR3621-201ENST00000580529 85 ntBASIC18.38■□□□□ 0.53
NR1H4Q96RI1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H4Q96RI1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 SRD5A1P1-201ENST00000442297 786 ntBASIC18.37■□□□□ 0.53
NR1H4Q96RI1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.37■□□□□ 0.53
NR1H4Q96RI1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
NR1H4Q96RI1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.36■□□□□ 0.53
NR1H4Q96RI1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H4Q96RI1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NR1H4Q96RI1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms