Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 CKBP1-201ENST00000565489 1086 ntBASIC24.02■■□□□ 1.44
CNKSR1Q969H4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.02■■□□□ 1.44
CNKSR1Q969H4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.02■■□□□ 1.44
CNKSR1Q969H4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.02■■□□□ 1.44
CNKSR1Q969H4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
CNKSR1Q969H4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CNKSR1Q969H4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CNKSR1Q969H4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CNKSR1Q969H4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 KRT8P45-201ENST00000414328 1447 ntBASIC24.01■■□□□ 1.43
CNKSR1Q969H4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR1Q969H4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR1Q969H4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24■■□□□ 1.43
CNKSR1Q969H4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR1Q969H4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24■■□□□ 1.43
CNKSR1Q969H4 BID-212ENST00000614949 1988 ntTSL 5 BASIC24■■□□□ 1.43
CNKSR1Q969H4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24■■□□□ 1.43
CNKSR1Q969H4 AC006128.1-201ENST00000624704 1661 ntBASIC24■■□□□ 1.43
CNKSR1Q969H4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR1Q969H4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR1Q969H4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24■■□□□ 1.43
CNKSR1Q969H4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24■■□□□ 1.43
CNKSR1Q969H4 AC112907.2-201ENST00000448639 330 ntBASIC24■■□□□ 1.43
CNKSR1Q969H4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC24■■□□□ 1.43
CNKSR1Q969H4 ZNF444P1-201ENST00000559497 298 ntBASIC24■■□□□ 1.43
CNKSR1Q969H4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24■■□□□ 1.43
CNKSR1Q969H4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24■■□□□ 1.43
CNKSR1Q969H4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
CNKSR1Q969H4 AC007225.1-201ENST00000566331 1836 ntBASIC24■■□□□ 1.43
CNKSR1Q969H4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CNKSR1Q969H4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24■■□□□ 1.43
CNKSR1Q969H4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24■■□□□ 1.43
CNKSR1Q969H4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.99■■□□□ 1.43
CNKSR1Q969H4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.98■■□□□ 1.43
CNKSR1Q969H4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 AC083849.1-201ENST00000615227 514 ntBASIC23.98■■□□□ 1.43
CNKSR1Q969H4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CNKSR1Q969H4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.97■■□□□ 1.43
CNKSR1Q969H4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.97■■□□□ 1.43
CNKSR1Q969H4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CNKSR1Q969H4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CNKSR1Q969H4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.97■■□□□ 1.43
CNKSR1Q969H4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.97■■□□□ 1.43
CNKSR1Q969H4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CNKSR1Q969H4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 STARP1-201ENST00000397973 869 ntBASIC23.96■■□□□ 1.43
CNKSR1Q969H4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 ATP5G2P1-201ENST00000433580 426 ntBASIC23.96■■□□□ 1.43
CNKSR1Q969H4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.96■■□□□ 1.43
CNKSR1Q969H4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms