Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTN4IP1Q8WWV3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 KRT18P68-201ENST00000392293 1000 ntBASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 CROCCP5-201ENST00000436658 830 ntBASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 AC093787.1-201ENST00000450396 207 ntBASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 AL050303.2-201ENST00000619798 666 ntBASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTN4IP1Q8WWV3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 AC105020.6-201ENST00000621523 1217 ntBASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 LINC01465-201ENST00000408887 1940 ntBASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN4IP1Q8WWV3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 AL355472.2-201ENST00000422958 438 ntBASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 AC006970.2-201ENST00000450065 779 ntBASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 AF201337.1-201ENST00000520239 748 ntBASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTN4IP1Q8WWV3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms