Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.22■□□□□ 0.67
RDH11Q8TC12 AL161938.1-201ENST00000569833 2180 ntBASIC19.22■□□□□ 0.67
RDH11Q8TC12 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RDH11Q8TC12 CROCCP3-202ENST00000420820 1947 ntBASIC19.21■□□□□ 0.67
RDH11Q8TC12 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.21■□□□□ 0.67
RDH11Q8TC12 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.21■□□□□ 0.67
RDH11Q8TC12 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RDH11Q8TC12 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.21■□□□□ 0.67
RDH11Q8TC12 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RDH11Q8TC12 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.21■□□□□ 0.67
RDH11Q8TC12 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
RDH11Q8TC12 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RDH11Q8TC12 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
RDH11Q8TC12 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 TFP1-202ENST00000475455 1573 ntBASIC19.2■□□□□ 0.66
RDH11Q8TC12 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RDH11Q8TC12 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RDH11Q8TC12 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RDH11Q8TC12 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RDH11Q8TC12 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
RDH11Q8TC12 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms