Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.41■□□□□ 0.54
SIMC1Q8NDZ2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 TREX1-205ENST00000625293 1783 ntBASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 AP001271.2-201ENST00000624018 1556 ntBASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ESRRAP1-201ENST00000400596 1257 ntBASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 AC026366.1-201ENST00000488803 879 ntBASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIMC1Q8NDZ2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SIMC1Q8NDZ2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SIMC1Q8NDZ2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SIMC1Q8NDZ2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 POM121L13P-201ENST00000422362 380 ntBASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIMC1Q8NDZ2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIMC1Q8NDZ2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms